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CAZyme Information: TRIREDRAFT_56448-t26_1-p1

You are here: Home > Sequence: TRIREDRAFT_56448-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma reesei
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma reesei
CAZyme ID TRIREDRAFT_56448-t26_1-p1
CAZy Family GH28
CAZyme Description glycoside hydrolase family 18
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
376 GL985058|CGC5 41485.41 4.3727
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TreeseiQM6a 9138 431241 7 9131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 21 357 3.9e-52 0.9459459459459459

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395573 Glyco_hydro_18 2.63e-73 21 353 1 307
Glycosyl hydrolases family 18.
119365 GH18_chitinase 4.84e-46 23 353 2 322
The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
214753 Glyco_18 1.47e-42 23 353 3 334
Glyco_18 domain.
225862 ChiA 6.73e-34 19 353 37 423
Chitinase, GH18 family [Carbohydrate transport and metabolism].
119349 GH18_chitinase-like 2.42e-32 22 205 1 178
The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are included in this alignment model.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.38e-202 1 373 1 373
1.60e-200 1 373 1 373
2.02e-196 1 371 1 371
1.00e-189 1 371 1 371
1.33e-167 1 370 1 366

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.37e-21 24 353 42 383
Structure of Chitinase 42 from Trichoderma harzianum [Trichoderma harzianum]
6.46e-19 24 353 42 383
Chain A, Endochitinase 42 [Trichoderma harzianum],6YN4_A Chain A, Endochitinase 42 [Trichoderma harzianum],7AKQ_A Chain A, Endochitinase 42 [Trichoderma harzianum]
1.00e-17 21 355 4 350
Crystal structure of Ostrinia furnacalis Group II chitinase catalytic domain 2 [Ostrinia furnacalis],5Y2A_B Crystal structure of Ostrinia furnacalis Group II chitinase catalytic domain 2 [Ostrinia furnacalis]
3.08e-17 36 364 72 412
Chain A, Glycosyl Hydrolase [Niallia circulans]
4.17e-17 80 248 109 281
Chain A, Putative chitinase II [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.44e-20 80 353 124 384
Endochitinase 1 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) OX=655844 GN=chit1 PE=3 SV=1
8.85e-20 24 353 43 383
Endochitinase 1 OS=Metarhizium anisopliae OX=5530 GN=chit1 PE=1 SV=1
2.20e-19 24 353 42 383
Endochitinase 42 OS=Trichoderma harzianum OX=5544 GN=chit42 PE=1 SV=1
2.98e-19 24 348 42 378
Chitinase 1 OS=Aphanocladium album OX=12942 GN=CHI1 PE=1 SV=2
1.55e-17 24 353 43 390
Endochitinase 46 OS=Trichoderma harzianum OX=5544 GN=chit46 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000279 0.999671 CS pos: 18-19. Pr: 0.9744

TMHMM  Annotations      help

There is no transmembrane helices in TRIREDRAFT_56448-t26_1-p1.