dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: TRIREDRAFT_54723-t26_1-p1

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Basic Information help

Species

Trichoderma reesei

Lineage

Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma reesei

CAZyme ID

TRIREDRAFT_54723-t26_1-p1

CAZy Family

GT69

CAZyme Description

predicted protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
276		29294.74	4.2288

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_TreeseiQM6a	9138	431241	7	9131

Gene Location

Full Sequence Download help

Enzyme Prediction help

EC	-	-

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
212030	LysM	6.12e-08	226	270	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
212030	LysM	1.59e-07	140	184	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
180536	PRK06347	2.30e-05	121	260	310	439	1,4-beta-N-acetylmuramoylhydrolase.
197609	LysM	2.46e-05	227	272	1	44	Lysin motif.
197609	LysM	9.70e-05	141	186	1	44	Lysin motif.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
6.07e-130	1	274	1	271
5.95e-112	1	274	1	258
3.17e-67	1	274	3	265
2.57e-65	28	274	40	288
6.45e-63	24	274	642	856

PDB Hits help

TRIREDRAFT_54723-t26_1-p1 has no PDB hit.

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
1.40e-39	31	274	41	293	LysM domain-containing protein ARB_05157 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_05157 PE=1 SV=1
1.38e-16	103	188	352	437	Probable peptidoglycan-N-acetylglucosamine deacetylase ARB_03699 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03699 PE=1 SV=2
2.00e-12	46	190	40	183	LysM domain-containing protein ARB_03438 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_03438 PE=3 SV=1
4.44e-12	23	194	356	542	LysM domain-containing protein ARB_00327 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_00327 PE=3 SV=2
2.48e-06	29	186	255	419	LysM domain-containing protein ARB_01155/01156 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_01155/01156 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000349	0.999586	CS pos: 18-19. Pr: 0.9664

TMHMM Annotations help

There is no transmembrane helices in TRIREDRAFT_54723-t26_1-p1.