CAZyme Information: TRIREDRAFT_54242-t26_1-p1

Basic Information

• Species: Trichoderma reesei
• Lineage: Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma reesei
• CAZyme ID: TRIREDRAFT_54242-t26_1-p1
• CAZy Family: GH20
• CAZyme Description: glycoside hydrolase family 55

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
764		79799.53	5.3456

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_TreeseiQM6a	9138	431241	7	9131

• Gene Location: location=GL985056:2396697-2399244(-)

Full Sequence      

MRSFSLLGSLSLLTSLSWALPTEGVISKLEGRQSGSSWFLPNIDHTTGAVRGYVPNLFNS
AGQQNFTYPVYKTVASGDSAGFVNALYSDGPSGGQRDNCYLAGEPRVIYLPPGTYTVSST
IFFDTDTVIIGDAANPPTIKAAAGFNGDYLIVGGQGDGDSHPCGGSGGETHFSVMIKNVI
LDTTANAGSSGFTALSWAVAQNCALVNVKINMPQGVHTGMLVSGGSTISISDVSFNFGNI
GLHWNGHQQGQIKGMTFTDCTNGIFIDSGFTISIFAPTCNTVGRCIVLNSGNAWVAVIDG
QSINSGDFFTSNVGFPNFMLENISKDTTNSNMVVVGGNVKVGGSTSLGTYVYGNTRGANP
VYQTNPTSQPVNRPAALAPGGRYPVINAPQYADKTVANVVNLKDPNQNGGHTLQGDGFTD
DTAALQGALNTAASQGKIAYLPFGIYIVKSTITIPPGTELYGEAWSTISGSGSAFSSETN
PTPVVQIGATPGQKGVAHVQDIRFTVNEALPGAILLRINMAGNNPGDVAVFNSLNTIGGT
RDTSISCSSESNCRAAYLGLHLAAGSSAYIDNFWSWVADHATDQSGKGTRTAVKGGVLVE
ATAGTWLTGLGSEHNWLYQLSFHNAANVFISLFQSETNYNQGNNGAPLPGTPFDATSIDP
NFSWCSGGDTVCRMGLAQYYTGSNSNIFHYAAGSWNFIGLTKVNQGLMNFIQSTISNAHL
YGFTSGPNTGETMRLPNGVEFGNGGNDGYGGSWGTLIANIASQS

Enzyme Prediction     

No EC number prediction in TRIREDRAFT_54242-t26_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	32	733	3.4e-162	0.9540540540540541

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	2.39e-28	103	274	32	200	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
403800	Pectate_lyase_3	1.04e-05	415	473	11	73	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QYT01722.1|GH55	0.0	1	764	1	763
UKZ54446.1|GH55	0.0	1	764	1	725
UKZ80224.1|GH55	0.0	1	764	1	725
UKZ58708.1|GH55	0.0	1	764	1	761
UKZ86438.1|GH55	0.0	1	764	1	762

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3EQN_A	8.36e-78	35	685	23	696	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]
5M5Z_A	5.62e-76	36	725	4	722	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P53626|E13B_TRIHA	1.09e-185	11	753	9	750	Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1
sp|P49426|EXG1_COCCA	3.71e-69	31	649	14	673	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
sp|D4B0V1|E13B_ARTBC	2.53e-65	36	729	41	846	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000381	0.999579	CS pos: 19-20. Pr: 0.9557

TMHMM  Annotations     

There is no transmembrane helices in TRIREDRAFT_54242-t26_1-p1.