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CAZyme Information: TRIREDRAFT_123283-t26_1-p1
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Trichoderma reesei | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma reesei | |||||||||||
| CAZyme ID | TRIREDRAFT_123283-t26_1-p1 | |||||||||||
| CAZy Family | CE3 | |||||||||||
| CAZyme Description | glycoside hydrolase family 54 | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.55:24 | 3.2.1.37:1 | 3.2.1.55:20 | 3.2.1.37:1 |
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CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH54 | 23 | 337 | 8.9e-159 | 0.9936708860759493 |
| CBM42 | 355 | 495 | 8.8e-59 | 0.9852941176470589 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 401229 | ArabFuran-catal | 0.0 | 23 | 336 | 1 | 315 | Alpha-L-arabinofuranosidase B, catalytic. Members of this family, which are present in fungal alpha-L-arabinofuranosidase B, adopt a beta-sandwich fold similar to that of Concanavalin A-like lectins/glucanase. The beta-sandwich fold consists of two anti-parallel beta-sheets with seven and and six strands, respectively. In addition, there are four helices outside of the beta-strands. The beta-sandwich strands are closely packed and curved with a jelly roll topology, creating a small catalytic pocket. The domain catalyzes the hydrolysis of alpha-1,2-, alpha-1,3- and alpha-1,5-L-arabinofuranosidic bonds in L-arabinose-containing hemicelluloses such as arabinoxylan and L-arabinan. |
| 398781 | AbfB | 3.71e-71 | 354 | 495 | 1 | 137 | Alpha-L-arabinofuranosidase B (ABFB) domain. This family consists of several fungal alpha-L-arabinofuranosidase B proteins. L-Arabinose is a constituent of plant-cell-wall poly-saccharides. It is found in a polymeric form in L-arabinan, in which the backbone is formed by 1,5-a- linked l-arabinose residues that can be branched via 1,2-a- and 1,3-a-linked l-arabinofuranose side chains. AbfB hydrolyzes 1,5-a, 1,3-a and 1,2-a linkages in both oligosaccharides and polysaccharides, which contain terminal non-reducing l-arabinofuranoses in side chains. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 0.0 | 1 | 500 | 1 | 500 | |
| 0.0 | 1 | 500 | 1 | 500 | |
| 0.0 | 1 | 500 | 1 | 500 | |
| 0.0 | 9 | 500 | 8 | 499 | |
| 0.0 | 9 | 500 | 8 | 499 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.46e-246 | 22 | 500 | 2 | 481 | Crystal structure of arabinofuranosidase [Aspergillus luchuensis],1WD4_A Crystal structure of arabinofuranosidase complexed with arabinose [Aspergillus luchuensis],6SXS_AAA Chain AAA, Alpha-L-arabinofuranosidase B [Aspergillus luchuensis] |
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| 6.70e-246 | 22 | 500 | 3 | 482 | GH54 a-l-arabinofuranosidase soaked with aziridine inhibitor [Aspergillus luchuensis IFO 4308] |
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| 1.85e-245 | 22 | 500 | 2 | 481 | E221Q mutant of GH54 a-l-arabinofuranosidase soaked with 4-nitrophenyl a-l-arabinofuranoside [Aspergillus luchuensis IFO 4308] |
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| 5.28e-245 | 22 | 500 | 2 | 481 | Chain A, alpha-L-arabinofuranosidase B [Aspergillus luchuensis],2D44_A Chain A, alpha-L-arabinofuranosidase B [Aspergillus luchuensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 0.0 | 1 | 500 | 1 | 500 | Arabinofuranosidase/B-xylosidase OS=Trichoderma koningii OX=97093 GN=xyl1 PE=3 SV=1 |
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| 0.0 | 1 | 500 | 1 | 500 | Alpha-L-arabinofuranosidase OS=Hypocrea jecorina OX=51453 GN=abf1 PE=2 SV=1 |
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| 3.40e-309 | 4 | 500 | 9 | 506 | Probable alpha-L-arabinofuranosidase B OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=abfB PE=3 SV=1 |
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| 3.64e-297 | 3 | 500 | 8 | 506 | Probable alpha-L-arabinofuranosidase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=abfB PE=3 SV=1 |
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| 2.11e-289 | 2 | 500 | 7 | 506 | Probable alpha-L-arabinofuranosidase B OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=abfB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000414 | 0.999551 | CS pos: 21-22. Pr: 0.9403 |