logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: TRIREDRAFT_123232-t26_1-p1

You are here: Home > Sequence: TRIREDRAFT_123232-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma reesei
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma reesei
CAZyme ID TRIREDRAFT_123232-t26_1-p1
CAZy Family CE3
CAZyme Description glycoside hydrolase family 12
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
234 25158.69 7.1207
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TreeseiQM6a 9138 431241 7 9131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.4:107 3.2.1.151:22 3.2.1.73:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH12 87 233 3.1e-49 0.9807692307692307

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
396303 Glyco_hydro_12 1.11e-98 29 234 1 207
Glycosyl hydrolase family 12.
235746 PRK06215 4.07e-30 19 232 40 236
hypothetical protein; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.07e-172 1 234 1 234
2.07e-172 1 234 1 234
2.07e-172 1 234 1 234
2.07e-172 1 234 1 234
2.07e-172 1 234 1 234

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.45e-162 18 234 2 218
Chain A, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1H8V_B Chain B, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1H8V_C Chain C, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1H8V_D Chain D, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1H8V_E Chain E, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1H8V_F Chain F, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei]
1.81e-161 18 234 2 218
Chain A, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1OA2_B Chain B, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1OA2_C Chain C, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1OA2_D Chain D, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1OA2_E Chain E, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1OA2_F Chain F, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei]
1.49e-160 18 234 2 218
Chain A, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei],1OLQ_B Chain B, ENDO-BETA-1,4-GLUCANASE [Trichoderma reesei]
1.04e-151 18 234 2 218
Chain A, ENDO-BETA-1-4-GLUCANASE [Trichoderma citrinoviride],1OA3_B Chain B, ENDO-BETA-1-4-GLUCANASE [Trichoderma citrinoviride],1OA3_C Chain C, ENDO-BETA-1-4-GLUCANASE [Trichoderma citrinoviride],1OA3_D Chain D, ENDO-BETA-1-4-GLUCANASE [Trichoderma citrinoviride]
8.00e-135 17 234 7 225
The X-ray Crystal Structure of the Trichoderma harzianum Endoglucanase 3 from family GH12 [Trichoderma harzianum],4H7M_B The X-ray Crystal Structure of the Trichoderma harzianum Endoglucanase 3 from family GH12 [Trichoderma harzianum]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.71e-87 1 233 1 236
Endoglucanase-1 OS=Aspergillus aculeatus OX=5053 PE=1 SV=1
3.94e-75 9 233 29 256
Endoglucanase cel12A OS=Magnaporthe oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958) OX=242507 GN=cel12A PE=1 SV=1
4.15e-73 1 234 1 239
Endoglucanase A OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=cekA PE=2 SV=2
1.00e-55 1 234 1 239
Xyloglucan-specific endo-beta-1,4-glucanase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xgeA PE=1 SV=1
1.38e-55 1 233 1 237
Probable xyloglucan-specific endo-beta-1,4-glucanase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=xgeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001410 0.998596 CS pos: 16-17. Pr: 0.9565

TMHMM  Annotations      help

There is no transmembrane helices in TRIREDRAFT_123232-t26_1-p1.