logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: TRIREDRAFT_110894-t26_1-p1

You are here: Home > Sequence: TRIREDRAFT_110894-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Trichoderma reesei
Lineage Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma reesei
CAZyme ID TRIREDRAFT_110894-t26_1-p1
CAZy Family AA4
CAZyme Description glycoside hydrolase family 5
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
479 52368.65 6.3853
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TreeseiQM6a 9138 431241 7 9131
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.164:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 25 471 2e-147 0.9956140350877193

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
405300 Glyco_hydr_30_2 1.49e-14 23 253 3 224
O-Glycosyl hydrolase family 30.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 1 479 1 479
0.0 1 479 1 478
3.03e-311 1 479 1 478
8.69e-311 1 479 1 478
3.20e-283 1 479 1 478

PDB Hits      help

TRIREDRAFT_110894-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
0.0 1 479 1 479
Endo-beta-1,6-galactanase OS=Hypocrea rufa OX=5547 GN=6GAL PE=1 SV=1
3.26e-11 10 422 22 566
Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000276 0.999704 CS pos: 20-21. Pr: 0.9771

TMHMM  Annotations      help

There is no transmembrane helices in TRIREDRAFT_110894-t26_1-p1.