CAZyme Information: TRIREDRAFT_108776-t26_1-p1

Basic Information

• Species: Trichoderma reesei
• Lineage: Ascomycota; Sordariomycetes; ; Hypocreaceae; Trichoderma; Trichoderma reesei
• CAZyme ID: TRIREDRAFT_108776-t26_1-p1
• CAZy Family: AA3
• CAZyme Description: glycoside hydrolase family 55

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
759	GL985068|CGC1	80483.88	6.9892

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_TreeseiQM6a	9138	431241	7	9131

• Gene Location: location=GL985068:397373-399797(-)

Full Sequence      

MLKLTTIFTLLLGAASATPTPSPAANDEGITKRATSFWYPNMDHVNAPRGFAPDLDGNFN
YQVYQTVNPGDGAALQRAITSDGSGSRHSQWFASQPRVVYIPPGTYTLSQTLRFNTDTVL
MGDATNPPIIKAAAGFSGDQILVSGQDPTTNEKGELSFAVSLKNVILDTTAIPGGNQFTA
LWWGVAQAAQLQNVKITMASSQNGNGHTGIRMGRGSTLGLADVRVERGQNGIWVDGHQQA
AFHNIYFFQNTVGMLISGGNTFSIFSSTFDTCGTGISNTGGAPWIALVDAKSINSGVTFT
TTGFPSFLIENLTKDTTSPVVIARGSTLVGASTHIDTYSFGNTVGRNPIYGEVRSQNTRP
GALAPGGRYPYVPPPTYADVPVSGFLNVKDPAQNGNRVVKGDNTVDEAATLNAILALAAS
QNKIAYFPFGKYRVDSTLFIPPGSRIVGEAWSTITGNGQFFKNENSPQPVVAVGRPGDVG
VAQIQDMRFTVSDVLPGAIVMQFNMAGRNPGDVALWNSLVTVGGTRGASALTNACTNPGN
ECKGAFLGIHITKNSSAYIQNVWNWVADHIAESFGGGSSIAGKGGVLVESSKATWLYALG
SEHWWLYQLNLRNANNVVVSMLQSETNYEQGANAQQVVPAPWVANVDAWGDPNFSWCSGG
DKRCRMGFGNYINGGSNIYTYASASWAFFSGPGQGCSQFQCQQTMHWIASTPSNLQAFGL
CSKDSVNTLRLGDGTLINTANGFTGSWPGGGGDVGRYTV

Enzyme Prediction     

EC	3.2.1.39:4

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	31	757	2.2e-230	0.9878378378378379

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	3.47e-38	71	276	17	212	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
403800	Pectate_lyase_3	0.006	385	460	1	74	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
UKZ48908.1|GH55	0.0	1	759	1	762
AAL84695.1|GH55	0.0	1	759	1	762
UKZ75437.1|GH55	0.0	1	759	1	739
ADB07373.1|GH55	0.0	1	759	1	762
ABM55269.1|GH55	0.0	1	759	1	762

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M5Z_A	1.54e-83	35	737	4	736	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
3EQN_A	2.09e-79	37	741	26	743	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P53626|E13B_TRIHA	0.0	1	759	1	762	Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1
sp|P49426|EXG1_COCCA	4.37e-74	49	719	56	750	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
sp|D4B0V1|E13B_ARTBC	7.57e-71	11	737	21	857	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000233	0.999748	CS pos: 17-18. Pr: 0.9859

TMHMM  Annotations     

There is no transmembrane helices in TRIREDRAFT_108776-t26_1-p1.