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CAZyme Information: TREMEDRAFT_74248-t26_1-p1

You are here: Home > Sequence: TREMEDRAFT_74248-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Tremella mesenterica
Lineage Basidiomycota; Tremellomycetes; ; Tremellaceae; Tremella; Tremella mesenterica
CAZyme ID TREMEDRAFT_74248-t26_1-p1
CAZy Family GT90
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
428 45245.92 7.1508
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmesentericaDSM1558 8309 578456 1 8308
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TREMEDRAFT_74248-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA11 40 221 2e-53 0.9214659685863874

CDD Domains      help

TREMEDRAFT_74248-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.69e-93 9 245 11 233
9.21e-88 9 245 11 233
9.21e-88 9 245 11 233
3.29e-48 7 240 9 226
2.40e-47 3 243 10 238

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.91e-32 40 220 12 203
Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Zn [Aspergillus oryzae],4MAI_A Structure of Aspergillus oryzae AA11 Lytic Polysaccharide Monooxygenase with Cu(I) [Aspergillus oryzae]

Swiss-Prot Hits      help

TREMEDRAFT_74248-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000512 0.999474 CS pos: 19-20. Pr: 0.6550

TMHMM  Annotations      help

There is no transmembrane helices in TREMEDRAFT_74248-t26_1-p1.