CAZyme Information: TREMEDRAFT_69512-t26_1-p1

Basic Information

• Species: Tremella mesenterica
• Lineage: Basidiomycota; Tremellomycetes; ; Tremellaceae; Tremella; Tremella mesenterica
• CAZyme ID: TREMEDRAFT_69512-t26_1-p1
• CAZy Family: GT4
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
290	JH711536|CGC7	33051.51	7.0175

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_TmesentericaDSM1558	8309	578456	1	8308

• Gene Location: location=JH711536:620142-621307(+)

Full Sequence      

MRVPHDPDQVSTATITNSSGLFTISTKVARPLADVGAGISWPVQERTSDPVAIFFQPVSK
LSWHWNWNKNWDRVLPETTPDLKIPAEFVPMIFSPNHLNDGVDVPQQWRVLMGFNEPDHD
DPSVATKCSPAEAAVAWTKLAALRKYPHQKLVSPGIAWDFEWLRNFLSLIPAHIKPDYLN
VHIYTTTFDSFQSQVKRYHSEFGLPLIITEFAMHSFNPMVPPPRNQQQVHDFMGQVTQWL
DKKDYIAAYSWFGAVRDGGNLHGVHHFNRLMNEEGKLTPLGRQYVFGGHT

Enzyme Prediction     

EC	3.2.1.-:1

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH128	58	284	3.9e-58	0.96875

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
371727	Glyco_hydro_cc	1.61e-59	48	284	5	235	Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AAW46223.1|GH128	4.68e-115	37	289	12	266
ADV24908.1|GH128	6.64e-115	37	289	12	266
UOH83831.1|GH128	7.11e-115	37	289	14	268
AUB23633.1|GH128	1.90e-114	37	289	12	266
AFR94030.1|GH128|3.2.1.-	1.90e-114	37	289	12	266

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6UB7_A	1.30e-115	37	289	32	286	Chain A, Glyco_hydro_cc domain-containing protein [Cryptococcus neoformans]
6UAV_A	5.62e-15	61	285	25	254	Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Pseudomonas viridiflava (PvGH128_II) [Pseudomonas viridiflava]
6UAW_A	7.45e-15	61	285	47	276	Crystal structure of a GH128 (subgroup II) endo-beta-1,3-glucanase from Pseudomonas viridiflava (PvGH128_II) in complex with laminaritriose [Pseudomonas viridiflava]
6UBC_A	7.80e-11	109	285	267	437	Chain A, Glyco_hydro_cc domain-containing protein [Cryptococcus neoformans]
6UB2_A	6.39e-09	106	255	96	233	Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) [Lentinula edodes],6UB2_B Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) [Lentinula edodes],6UB2_C Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) [Lentinula edodes],6UB2_D Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) [Lentinula edodes],6UB3_A Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) with laminaribiose at the surface-binding site [Lentinula edodes],6UB3_B Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) with laminaribiose at the surface-binding site [Lentinula edodes],6UB4_A Crystal structure (C2 form) of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) in complex with laminaritriose [Lentinula edodes],6UB4_B Crystal structure (C2 form) of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) in complex with laminaritriose [Lentinula edodes],6UB5_A Crystal structure (P21 form) of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) in complex with laminaritriose [Lentinula edodes],6UB6_A Crystal structure of a GH128 (subgroup IV) endo-beta-1,3-glucanase from Lentinula edodes (LeGH128_IV) in complex with laminaritetraose [Lentinula edodes]

Swiss-Prot Hits     

TREMEDRAFT_69512-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000022	0.000016

TMHMM  Annotations     

There is no transmembrane helices in TREMEDRAFT_69512-t26_1-p1.