logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: TREMEDRAFT_62741-t26_1-p1

You are here: Home > Sequence: TREMEDRAFT_62741-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Tremella mesenterica
Lineage Basidiomycota; Tremellomycetes; ; Tremellaceae; Tremella; Tremella mesenterica
CAZyme ID TREMEDRAFT_62741-t26_1-p1
CAZy Family GT20
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
604 64104.20 4.1189
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmesentericaDSM1558 8309 578456 1 8308
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TREMEDRAFT_62741-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA3 33 602 1.3e-157 0.9964788732394366

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
235000 PRK02106 2.56e-72 33 601 4 532
choline dehydrogenase; Validated
225186 BetA 1.94e-67 34 604 7 537
Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
398739 GMC_oxred_C 5.71e-38 452 596 1 143
GMC oxidoreductase. This domain found associated with pfam00732.
366272 GMC_oxred_N 1.12e-18 95 342 12 214
GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
215420 PLN02785 7.40e-18 251 577 229 553
Protein HOTHEAD

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
7.13e-213 19 604 30 620
6.76e-205 26 604 37 617
7.23e-204 13 604 17 615
1.37e-196 10 601 10 603
1.70e-195 10 601 10 595

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.08e-215 19 604 1 591
Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUU_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUV_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina]
9.08e-111 30 601 1 565
Crystal structure of Aspergillus flavus FAD glucose dehydrogenase [Aspergillus flavus NRRL3357],4YNU_A Crystal structure of Aspergillus flavus FADGDH in complex with D-glucono-1,5-lactone [Aspergillus flavus NRRL3357]
3.07e-95 21 600 4 573
Glucose oxidase mutant A2 [Aspergillus niger]
8.97e-95 21 600 6 575
GLUCOSE OXIDASE FROM APERGILLUS NIGER [Aspergillus niger],1GAL_A CRYSTAL STRUCTURE OF GLUCOSE OXIDASE FROM ASPERGILLUS NIGER: REFINED AT 2.3 ANGSTROMS RESOLUTION [Aspergillus niger],3QVP_A Crystal structure of glucose oxidase for space group C2221 at 1.2 A resolution [Aspergillus niger],3QVR_A Crystal structure of glucose oxidase for space group P3121 at 1.3 A resolution. [Aspergillus niger]
1.68e-94 21 600 4 573
Glucose oxydase mutant A2 [Aspergillus niger]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.16e-102 29 600 41 615
GMC oxidoreductase family protein Mala s 12 OS=Malassezia sympodialis (strain ATCC 42132) OX=1230383 GN=MSY001_2108 PE=1 SV=1
3.16e-102 29 600 41 615
GMC oxidoreductase family protein Mala s 12.0101 OS=Malassezia sympodialis OX=76777 PE=1 SV=2
8.17e-94 21 600 28 597
Glucose oxidase OS=Aspergillus niger OX=5061 GN=gox PE=1 SV=1
2.80e-93 21 600 11 579
Glucose oxidase OS=Penicillium amagasakiense OX=63559 PE=1 SV=1
7.15e-91 21 600 29 597
Glucose oxidase OS=Talaromyces flavus OX=5095 GN=GOX PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000435 0.999535 CS pos: 19-20. Pr: 0.9755

TMHMM  Annotations      help

There is no transmembrane helices in TREMEDRAFT_62741-t26_1-p1.