logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: TREMEDRAFT_59670-t26_1-p1

You are here: Home > Sequence: TREMEDRAFT_59670-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Tremella mesenterica
Lineage Basidiomycota; Tremellomycetes; ; Tremellaceae; Tremella; Tremella mesenterica
CAZyme ID TREMEDRAFT_59670-t26_1-p1
CAZy Family GT2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
264 JH711528|CGC8 29261.67 5.0002
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmesentericaDSM1558 8309 578456 1 8308
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA14 6 262 2.2e-68 0.9372549019607843

CDD Domains      help

TREMEDRAFT_59670-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.87e-58 22 262 47 291
3.77e-52 6 262 26 275
1.50e-42 6 262 30 278
1.87e-40 6 262 1 244
1.87e-40 6 262 1 244

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.34e-42 24 262 22 257
Crystal Structure of a Xylan-active Lytic Polysaccharide Monooxygenase from Pycnoporus coccineus. [Trametes cinnabarina],5NO7_B Crystal Structure of a Xylan-active Lytic Polysaccharide Monooxygenase from Pycnoporus coccineus. [Trametes cinnabarina]

Swiss-Prot Hits      help

TREMEDRAFT_59670-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000050 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in TREMEDRAFT_59670-t26_1-p1.