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CAZyme Information: TREMEDRAFT_42766-t26_1-p1

You are here: Home > Sequence: TREMEDRAFT_42766-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Tremella mesenterica
Lineage Basidiomycota; Tremellomycetes; ; Tremellaceae; Tremella; Tremella mesenterica
CAZyme ID TREMEDRAFT_42766-t26_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
186 JH711529|CGC4 20194.69 3.9006
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmesentericaDSM1558 8309 578456 1 8308
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TREMEDRAFT_42766-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH128 9 179 5e-35 0.7678571428571429

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371727 Glyco_hydro_cc 3.06e-32 1 179 53 235
Glycosyl hydrolase catalytic core. This family is probably a glycosyl hydrolase, and is conserved in fungi and some Proteobacteria. The pombe member is annotated as being from IPR013781.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.91e-68 4 186 69 253
3.59e-67 4 186 69 253
4.76e-66 4 186 85 269
9.55e-66 4 186 85 269
9.52e-65 4 186 69 253

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6.43e-69 4 186 91 275
Chain A, Glyco_hydro_cc domain-containing protein [Trichoderma gamsii]
1.56e-67 1 186 256 443
Chain A, Glyco_hydro_cc domain-containing protein [Cryptococcus neoformans]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.75e-11 14 181 360 530
Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=asl1 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999925 0.000127

TMHMM  Annotations      help

There is no transmembrane helices in TREMEDRAFT_42766-t26_1-p1.