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CAZyme Information: TREMEDRAFT_41567-t26_1-p1

You are here: Home > Sequence: TREMEDRAFT_41567-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Tremella mesenterica
Lineage Basidiomycota; Tremellomycetes; ; Tremellaceae; Tremella; Tremella mesenterica
CAZyme ID TREMEDRAFT_41567-t26_1-p1
CAZy Family GH38
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
420 JH711528|CGC9 45109.35 4.5171
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmesentericaDSM1558 8309 578456 1 8308
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TREMEDRAFT_41567-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 136 371 4.1e-30 0.7469879518072289

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
226678 YesR 9.37e-14 137 344 100 313
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].
400034 Glyco_hydro_88 3.89e-11 140 305 96 261
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.55e-162 14 395 16 399
5.86e-160 14 409 16 416
5.86e-160 14 409 16 416
5.86e-160 14 409 16 416
3.36e-159 14 409 16 416

PDB Hits      help

TREMEDRAFT_41567-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

TREMEDRAFT_41567-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000243 0.999724 CS pos: 17-18. Pr: 0.9732

TMHMM  Annotations      help

There is no transmembrane helices in TREMEDRAFT_41567-t26_1-p1.