logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: TREMEDRAFT_32359-t26_1-p1

You are here: Home > Sequence: TREMEDRAFT_32359-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Tremella mesenterica
Lineage Basidiomycota; Tremellomycetes; ; Tremellaceae; Tremella; Tremella mesenterica
CAZyme ID TREMEDRAFT_32359-t26_1-p1
CAZy Family CE9|CE9
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
378 40131.90 4.8180
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmesentericaDSM1558 8309 578456 1 8308
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TREMEDRAFT_32359-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL14 117 336 2.4e-68 0.9857142857142858

CDD Domains      help

TREMEDRAFT_32359-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.26e-140 23 355 25 373
7.01e-139 23 355 25 368
9.94e-139 23 355 25 368
1.14e-137 23 355 25 368
1.14e-137 23 355 25 368

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.66e-42 119 336 59 270
Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai]

Swiss-Prot Hits      help

TREMEDRAFT_32359-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000366 0.999596 CS pos: 21-22. Pr: 0.9780

TMHMM  Annotations      download full data without filtering help

Start End
355 377