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CAZyme Information: TREMEDRAFT_29143-t26_1-p1

You are here: Home > Sequence: TREMEDRAFT_29143-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Tremella mesenterica
Lineage Basidiomycota; Tremellomycetes; ; Tremellaceae; Tremella; Tremella mesenterica
CAZyme ID TREMEDRAFT_29143-t26_1-p1
CAZy Family CBM48
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
232 25822.20 4.7296
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmesentericaDSM1558 8309 578456 1 8308
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 1.14.99.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA14 20 214 1e-75 0.7647058823529411

CDD Domains      help

TREMEDRAFT_29143-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.09e-81 4 215 3 219
1.21e-80 6 215 5 219
9.27e-80 4 215 8 224
1.86e-76 4 212 3 216
2.05e-76 4 212 8 221

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.38e-58 20 211 1 193
Crystal Structure of a Xylan-active Lytic Polysaccharide Monooxygenase from Pycnoporus coccineus. [Trametes cinnabarina],5NO7_B Crystal Structure of a Xylan-active Lytic Polysaccharide Monooxygenase from Pycnoporus coccineus. [Trametes cinnabarina]

Swiss-Prot Hits      help

TREMEDRAFT_29143-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000301 0.999674 CS pos: 19-20. Pr: 0.9804

TMHMM  Annotations      help

There is no transmembrane helices in TREMEDRAFT_29143-t26_1-p1.