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CAZyme Information: TREMEDRAFT_19145-t26_1-p1

You are here: Home > Sequence: TREMEDRAFT_19145-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Tremella mesenterica
Lineage Basidiomycota; Tremellomycetes; ; Tremellaceae; Tremella; Tremella mesenterica
CAZyme ID TREMEDRAFT_19145-t26_1-p1
CAZy Family AA1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
152 16695.48 4.9704
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_TmesentericaDSM1558 8309 578456 1 8308
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TREMEDRAFT_19145-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM13 12 147 8.2e-16 0.6382978723404256

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395527 Ricin_B_lectin 2.13e-14 13 147 7 125
Ricin-type beta-trefoil lectin domain.
238092 RICIN 1.04e-13 9 147 2 121
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.
214672 RICIN 8.93e-09 13 150 3 118
Ricin-type beta-trefoil. Carbohydrate-binding domain formed from presumed gene triplication.
395527 Ricin_B_lectin 8.62e-07 8 96 46 126
Ricin-type beta-trefoil lectin domain.
395527 Ricin_B_lectin 2.07e-05 58 151 2 85
Ricin-type beta-trefoil lectin domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.13e-36 3 152 32 180
8.67e-36 1 152 29 180
8.67e-36 1 152 29 180
9.22e-35 1 152 29 180
9.86e-35 1 152 29 180

PDB Hits      help

TREMEDRAFT_19145-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

TREMEDRAFT_19145-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000074 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in TREMEDRAFT_19145-t26_1-p1.