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CAZyme Information: TPX53656.1

You are here: Home > Sequence: TPX53656.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Synchytrium endobioticum
Lineage Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum
CAZyme ID TPX53656.1
CAZy Family GT61
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
539 59995.25 7.0436
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SendobioticumMB42 8031 N/A 0 8031
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2 3.2.1.23:1 3.2.1.38:1 3.2.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 186 390 3.5e-83 0.5034965034965035

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 8.76e-124 186 529 10 422
Glycosyl hydrolase family 1.
225343 BglB 2.60e-113 186 529 9 424
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 8.50e-64 186 529 33 453
beta-glucosidase
215539 PLN02998 6.97e-62 186 529 36 458
beta-glucosidase
215455 PLN02849 1.44e-58 187 529 36 453
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.60e-95 186 535 7 434
1.94e-91 188 535 66 487
3.05e-89 186 535 47 484
8.93e-88 186 535 52 497
1.26e-87 186 535 52 497

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.66e-87 186 535 39 483
Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTK_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTM_A Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTM_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTQ_A Chain A, Beta-glucosidase Os4BGlu12 [Oryza sativa],3PTQ_B Chain B, Beta-glucosidase Os4BGlu12 [Oryza sativa]
8.85e-86 186 535 16 426
Chain A, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1H_B Chain B, ANCESTRAL RECONSTRUCTED GLYCOSIDASE [synthetic construct],6Z1M_A Chain A, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_B Chain B, Ancestral reconstructed glycosidase [synthetic construct],6Z1M_C Chain C, Ancestral reconstructed glycosidase [synthetic construct]
8.92e-83 187 529 27 463
Chain A, Glycoside hydrolase family 1 [Trichoderma reesei QM6a],6KHT_B Chain B, Glycoside hydrolase family 1 [Trichoderma reesei QM6a],6KHT_C Chain C, Glycoside hydrolase family 1 [Trichoderma reesei QM6a]
1.24e-82 188 535 19 447
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with Tris [Neotermes koshunensis],3VIF_A Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with gluconolactone [Neotermes koshunensis],3VIG_A Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with 1-deoxynojirimycin [Neotermes koshunensis],3VIH_A Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with glycerol [Neotermes koshunensis],3VII_A Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with Bis-Tris [Neotermes koshunensis]
1.94e-82 187 535 28 460
Chain A, Beta-glucosidase 42 [Arabidopsis thaliana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.74e-87 186 535 30 474
Beta-glucosidase 25 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU25 PE=2 SV=2
1.57e-86 186 535 44 488
Beta-glucosidase 12 OS=Oryza sativa subsp. indica OX=39946 GN=BGLU12 PE=3 SV=1
1.57e-86 186 535 44 488
Beta-glucosidase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU12 PE=1 SV=2
3.02e-85 186 535 40 484
Beta-glucosidase 13 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU13 PE=2 SV=2
7.82e-85 186 535 45 488
Beta-glucosidase 11 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU11 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000050 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in TPX53656.1.