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CAZyme Information: TPX52636.1

You are here: Home > Sequence: TPX52636.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Synchytrium endobioticum
Lineage Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum
CAZyme ID TPX52636.1
CAZy Family GT4
CAZyme Description Beta-mannosidase [Source:UniProtKB/TrEMBL;Acc:A0A507DM90]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1201 137187.09 6.4801
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SendobioticumMB42 8031 N/A 0 8031
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.25:19 3.2.1.25:19

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH2 50 758 1.2e-89 0.699468085106383

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
225789 LacZ 5.31e-70 43 693 5 635
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
401639 Nt_Gln_amidase 6.11e-57 1059 1192 40 172
N-terminal glutamine amidase. This protein is conserved from plants to humans. It represents a family of N terminal glutamine amidases. The enzyme removes the NH2 group from a Gln, at the N-terminal, rendering it a Glu.
407625 Ig_mannosidase 4.59e-17 822 893 15 78
Ig-fold domain. This Ig-like fold domain is found in mannosidase enzymes.
236673 ebgA 1.32e-09 47 454 60 449
cryptic beta-D-galactosidase subunit alpha; Reviewed
407658 Mannosidase_ig 2.25e-06 701 791 1 89
Mannosidase Ig/CBM-like domain. This domain corresponds to domain 4 in the structure of Bacteroides thetaiotaomicron beta-mannosidase, BtMan2A. This domain has an Ig-like fold.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.21e-179 57 880 28 872
1.21e-178 48 870 20 861
6.61e-178 48 870 20 861
5.07e-177 57 880 28 872
5.07e-177 48 870 20 861

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.78e-178 48 880 9 861
mouse beta-mannosidase (MANBA) [Mus musculus],6DDU_A mouse beta-mannosidase bound to beta-D-mannose (MANBA) [Mus musculus]
3.21e-118 69 857 33 825
Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri in complex with mannose [Xanthomonas citri pv. citri str. 306],6BYE_B Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri in complex with mannose [Xanthomonas citri pv. citri str. 306]
3.29e-118 69 857 33 825
Crystal structure of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306]
5.89e-118 69 857 31 823
Crystal structure of the acid-base mutant (E477A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306],6BYI_B Crystal structure of the acid-base mutant (E477A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306]
2.24e-117 69 857 33 825
Crystal structure of the nucleophile mutant (E575A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306],6BYG_B Crystal structure of the nucleophile mutant (E575A) of the GH2 exo-beta-mannanase from Xanthomonas axonopodis pv. citri [Xanthomonas citri pv. citri str. 306]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
8.36e-179 48 870 20 861
Beta-mannosidase OS=Homo sapiens OX=9606 GN=MANBA PE=1 SV=3
2.50e-177 57 880 28 872
Beta-mannosidase OS=Mus musculus OX=10090 GN=Manba PE=1 SV=1
1.12e-174 44 870 16 861
Beta-mannosidase OS=Capra hircus OX=9925 GN=MANBA PE=1 SV=1
1.79e-173 57 880 28 874
Beta-mannosidase OS=Rattus norvegicus OX=10116 GN=Manba PE=2 SV=1
3.83e-171 44 870 16 861
Beta-mannosidase OS=Bos taurus OX=9913 GN=MANBA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000078 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in TPX52636.1.