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CAZyme Information: TPX52390.1

You are here: Home > Sequence: TPX52390.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Synchytrium endobioticum
Lineage Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum
CAZyme ID TPX52390.1
CAZy Family GT39
CAZyme Description chitosanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
566 QEAN01000037|CGC1 62237.37 6.0510
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SendobioticumMB42 8031 N/A 0 8031
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.132:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH46 248 470 2.3e-49 0.9594594594594594

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
381600 chitosanase_GH46 9.79e-55 248 470 4 217
chitosanase belonging to the glycosyl hydrolase 46 family. This family is composed of the chitosanase enzymes which hydrolyzes chitosan, a biopolymer of beta (1,4)-linked-D-glucosamine (GlcN) residues produced by partial or full deacetylation of chitin. Chitosanases play a role in defense against pathogens such as fungi and are found in microorganisms, fungi, viruses, and plants. Microbial chitosanases can be divided into 3 subclasses based on the specificity of the cleavage positions for partial acetylated chitosan. Subclass I chitosanases such as N174 can split GlcN-GlcN and GlcNAc-GlcN linkages, whereas subclass II chitosanases such as Bacillus sp. no. 7-M can cleave only GlcN-GlcN linkages. Subclass III chitosanases such as MH-K1 chitosanase are the most versatile and can split both GlcN-GlcN and GlcN-GlcNAc linkages.
396099 Glyco_hydro_46 3.70e-37 254 456 2 195
Glycosyl hydrolase family 46. This family are chitosanase enzymes.
185504 PTZ00184 8.50e-35 1 143 1 139
calmodulin; Provisional
227455 FRQ1 4.32e-25 10 143 18 147
Ca2+-binding protein, EF-hand superfamily [Signal transduction mechanisms].
185503 PTZ00183 3.51e-21 10 142 15 144
centrin; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
8.79e-43 248 460 49 255
1.03e-41 251 458 47 248
5.47e-41 250 459 33 236
5.38e-40 248 486 8 241
1.18e-39 248 486 37 270

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.17e-42 250 459 10 213
Chain A, chitosanase [Gynuella sunshinyii YC6258],6X2Q_A Chain A, Chitosanase [Gynuella sunshinyii YC6258]
3.57e-41 248 486 8 241
Chain A, Chitosanase [Bacillus subtilis subsp. subtilis str. 168]
2.53e-40 248 486 8 241
Chain A, Chitosanase [Bacillus subtilis subsp. subtilis str. 168]
1.30e-24 242 434 5 190
Streptomyces N174 Chitosanase Ph5.5 298k [Streptomyces sp. N174],1CHK_B Streptomyces N174 Chitosanase Ph5.5 298k [Streptomyces sp. N174]
8.37e-22 13 142 11 137
2.0 Angstrom crystal structure of the D95V Ca/CaM:CaV1.2 IQ domain complex [Homo sapiens],6DAE_B 2.0 Angstrom crystal structure of the D95V Ca/CaM:CaV1.2 IQ domain complex [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4.70e-40 248 486 43 276
Chitosanase OS=Bacillus subtilis (strain 168) OX=224308 GN=csn PE=1 SV=1
1.99e-25 1 142 1 138
Calmodulin OS=Triticum aestivum OX=4565 PE=1 SV=3
5.77e-25 13 142 1 127
Neo-calmodulin (Fragment) OS=Gallus gallus OX=9031 PE=2 SV=1
4.60e-24 1 142 1 138
Calmodulin OS=Macrocystis pyrifera OX=35122 PE=2 SV=3
1.14e-23 242 434 45 230
Chitosanase OS=Streptomyces sp. (strain N174) OX=69019 GN=csn PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000077 0.000000

TMHMM  Annotations      download full data without filtering help

Start End
510 532