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CAZyme Information: TPX46016.1

You are here: Home > Sequence: TPX46016.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Synchytrium endobioticum
Lineage Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum
CAZyme ID TPX46016.1
CAZy Family GH47
CAZyme Description GH26 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A507CP39]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
466 51542.11 6.2416
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SendobioticumMB42 8031 N/A 0 8031
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TPX46016.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH26 110 327 3.3e-19 0.47194719471947194

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
226609 ManB2 0.006 104 289 150 296
Beta-mannanase [Carbohydrate transport and metabolism].
395327 Dockerin_1 0.009 192 216 23 47
Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.83e-44 17 439 40 447
2.96e-41 102 351 117 357
5.19e-36 9 377 19 372
6.20e-36 82 379 87 370
8.06e-35 110 377 126 382

PDB Hits      help

TPX46016.1 has no PDB hit.

Swiss-Prot Hits      help

TPX46016.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000000 0.000060

TMHMM  Annotations      help

There is no transmembrane helices in TPX46016.1.