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CAZyme Information: TPX45855.1

You are here: Home > Sequence: TPX45855.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Synchytrium endobioticum
Lineage Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum
CAZyme ID TPX45855.1
CAZy Family GH47
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
625 QEAN01000146|CGC1 65006.16 7.0373
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SendobioticumMB42 8031 N/A 0 8031
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.166:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH79 97 391 3.3e-22 0.6725274725274726

CDD Domains      help

TPX45855.1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.66e-21 71 562 438 877
3.20e-21 94 564 138 612
7.73e-21 94 564 148 622
2.37e-17 94 567 513 979
1.28e-14 75 491 67 442

PDB Hits      help

TPX45855.1 has no PDB hit.

Swiss-Prot Hits      help

TPX45855.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.992656 0.007336

TMHMM  Annotations      help

There is no transmembrane helices in TPX45855.1.