You are browsing environment: FUNGIDB
CAZyme Information: TPX45853.1
You are here: Home > Sequence: TPX45853.1
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Synchytrium endobioticum | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum | |||||||||||
| CAZyme ID | TPX45853.1 | |||||||||||
| CAZy Family | GH46 | |||||||||||
| CAZyme Description | unspecified product | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | ||||||||||||
Enzyme Prediction help
| EC | 3.2.1.166:1 |
|---|
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH79 | 25 | 375 | 3.9e-42 | 0.7472527472527473 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| 407104 | Glyco_hydro_79C | 6.11e-04 | 441 | 510 | 36 | 94 | Glycosyl hydrolase family 79 C-terminal beta domain. This domain is found at the C-terminus of glycosyl hydrolase family 79 proteins. It's function is not yet known. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| 1.40e-33 | 51 | 499 | 535 | 963 | |
| 1.95e-25 | 55 | 514 | 479 | 880 | |
| 8.99e-25 | 13 | 488 | 63 | 523 | |
| 1.28e-21 | 53 | 513 | 98 | 549 | |
| 1.28e-21 | 53 | 513 | 98 | 549 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6.21e-18 | 23 | 482 | 26 | 424 | Crystallographic structure of a bacterial heparanase [Burkholderia pseudomallei],5BWI_B Crystallographic structure of a bacterial heparanase [Burkholderia pseudomallei] |
|
| 5.78e-11 | 76 | 367 | 75 | 357 | beta-glucuronidase with an activity-based probe (N-acyl cyclophellitol aziridine) bound [Acidobacterium capsulatum],5G0Q_A beta-glucuronidase with an activity-based probe (N-alkyl cyclophellitol aziridine) bound [Acidobacterium capsulatum] |
|
| 5.96e-11 | 76 | 367 | 75 | 357 | Crystal structure of beta-glucuronidase from Acidobacterium capsulatum [Acidobacterium capsulatum ATCC 51196],3VNZ_A Crystal structure of beta-glucuronidase from Acidobacterium capsulatum in complex with D-glucuronic acid [Acidobacterium capsulatum ATCC 51196],3VO0_A Crystal structure of beta-glucuronidase from Acidobacterium capsulatum covalent-bonded with 2-deoxy-2-fluoro-D-glucuronic acid [Acidobacterium capsulatum ATCC 51196] |
|
| 1.40e-10 | 76 | 367 | 95 | 377 | A glycoside hydrolase mutant with an unreacted activity based probe bound [Acidobacterium capsulatum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 1.60e-07 | 27 | 327 | 37 | 352 | Beta-glucuronidase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=NCU00937 PE=1 SV=1 |
|
| 3.61e-07 | 157 | 335 | 185 | 373 | Beta-glucuronidase OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=An02g11890 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | CS Position |
|---|---|---|
| 0.000254 | 0.999721 | CS pos: 18-19. Pr: 0.9750 |