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CAZyme Information: TPX43706.1

You are here: Home > Sequence: TPX43706.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Synchytrium endobioticum
Lineage Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum
CAZyme ID TPX43706.1
CAZy Family GH30
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
675 QEAN01000192|CGC1 76229.95 8.5885
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SendobioticumMB42 8031 N/A 0 8031
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.312:12

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT61 473 553 4.7e-17 0.6722689075630253

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
398330 DUF563 1.91e-21 480 581 106 204
Protein of unknown function (DUF563). Family of uncharacterized proteins.
226845 COG4421 7.60e-09 481 562 228 308
Capsular polysaccharide biosynthesis protein [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.15e-58 201 623 68 429
2.20e-57 201 623 68 430
2.20e-57 201 623 68 430
2.93e-57 201 623 68 430
2.93e-57 201 623 68 430

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.72e-57 201 623 28 391
Chain A, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9J_B Chain B, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9K_A Chain A, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9K_B Chain B, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9K_D Chain D, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9K_E Chain E, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9L_A Chain A, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9L_B Chain B, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus]
5.55e-57 201 623 22 385
Chain D, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Homo sapiens]
9.77e-57 201 623 18 381
Chain A, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Homo sapiens]
1.06e-56 201 623 22 385
Chain A, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Homo sapiens]
1.83e-56 201 623 18 381
Chain C, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Homo sapiens]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.91e-58 201 623 68 430
Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 OS=Xenopus laevis OX=8355 GN=pomgnt2 PE=2 SV=1
5.20e-58 201 623 68 430
Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 OS=Xenopus tropicalis OX=8364 GN=pomgnt2 PE=2 SV=1
1.88e-56 201 623 68 431
Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 OS=Danio rerio OX=7955 GN=pomgnt2 PE=2 SV=1
1.95e-56 201 623 69 432
Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 OS=Bos taurus OX=9913 GN=POMGNT2 PE=1 SV=1
9.76e-56 201 623 69 432
Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 OS=Rattus norvegicus OX=10116 GN=Pomgnt2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999975 0.000035

TMHMM  Annotations      download full data without filtering help

Start End
37 59