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CAZyme Information: TPX42171.1

You are here: Home > Sequence: TPX42171.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Synchytrium endobioticum
Lineage Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum
CAZyme ID TPX42171.1
CAZy Family GH2
CAZyme Description Hexosyltransferase [Source:UniProtKB/TrEMBL;Acc:A0A507CSY2]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
300 34188.10 7.9352
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SendobioticumMB42 8031 N/A 0 8031
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TPX42171.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT31 72 186 4.3e-21 0.5885416666666666

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
250845 Galactosyl_T 1.91e-13 71 236 1 192
Galactosyltransferase. This family includes the galactosyltransferases UDP-galactose:2-acetamido-2-deoxy-D-glucose3beta-galactosyltransferase and UDP-Gal:beta-GlcNAc beta 1,3-galactosyltranferase. Specific galactosyltransferases transfer galactose to GlcNAc terminal chains in the synthesis of the lacto-series oligosaccharides types 1 and 2.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.14e-43 48 290 66 321
2.02e-38 46 284 33 273
9.42e-38 36 272 44 284
8.47e-36 38 272 51 288
2.32e-35 58 289 136 366

PDB Hits      help

TPX42171.1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.72e-11 48 283 55 351
Beta-1,3-galactosyltransferase pvg3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=pvg3 PE=1 SV=1
9.73e-06 61 209 88 240
Probable beta-1,3-galactosyltransferase 13 OS=Arabidopsis thaliana OX=3702 GN=B3GALT13 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000022 0.000005

TMHMM  Annotations      download full data without filtering help

Start End
10 32