CAZyme Information: TPX41707.1

Basic Information

• Species: Synchytrium endobioticum
• Lineage: Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum
• CAZyme ID: TPX41707.1
• CAZy Family: GH16
• CAZyme Description: Glucanase [Source:UniProtKB/TrEMBL;Acc:A0A507CRB6]

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
418		44072.09	7.0197

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_SendobioticumMB42	8031	N/A	0	8031

• Gene Location: location=QEAN01000260:798-2435(+)

Full Sequence      

MLKLLLTTSALLGPALAQTTAGAPAVTAYVMPAAAGAVPVADNPYAGASVYVSAQYAQKV
QSSIVAAGANTTLVAAMQKVTTYPSFTWYDTMASLTNMSMHLKAAGDQGAGKNIIFQAVL
YNLPNRDCNALASNGEIPQGELETYKTKYVDVFVAALKAKPANVIPVIIIEPDSLPNMAT
NLGKMKCDEKSNVEYRAGIAYAISQLSSIPGVVLYMDYGHGGWGGWPKNQAALPVIYKDV
LDKAKALNPQSTFRGYASNVANYSPFKGNGACPAQEKCPLVNNMYDYNPCIDEDLYSTLS
GKALTAAGLPNRWIVDTSRSGQKNIRQQWGSWCNLNAAGIGERPATDPSAVVDALVWAKP
PGDSDGTSAAGAARLDKNCVPSTNKADVGFNALPNAPEAGQWFDAQFAMLVANANPAL

Enzyme Prediction     

EC	3.2.1.91:55	3.2.1.4:4

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH6	61	369	2.5e-74	0.9591836734693877

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
396075	Glyco_hydro_6	7.57e-99	70	374	1	293	Glycosyl hydrolases family 6.
227616	CelA1	3.74e-58	42	418	23	443	Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AAT64008.1|CBM1|GH6|3.2.1.91	2.13e-83	38	418	83	442
QDK64601.1|CBM1|GH6	2.87e-82	39	418	91	449
VWO94836.1|CBM1|GH6	9.66e-80	39	418	78	436
ADN88317.1|CBM1|GH6	2.57e-79	39	418	101	459
QRV87995.1|CBM1|GH6	5.45e-78	42	418	102	458

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3A64_A	5.37e-75	43	418	14	379	Chain A, Cellobiohydrolase [Coprinopsis cinerea],3A9B_A Chain A, Cellobiohydrolase [Coprinopsis cinerea],3ABX_A Chain A, Cellobiohydrolase [Coprinopsis cinerea]
3VOF_A	8.34e-74	43	418	14	379	Chain A, Cellobiohydrolase [Coprinopsis cinerea]
3VOG_A	1.68e-70	38	418	3	362	Chain A, Cellobiohydrolase [Coprinopsis cinerea],3VOH_A Chain A, Cellobiohydrolase [Coprinopsis cinerea],3VOI_A Chain A, Cellobiohydrolase [Coprinopsis cinerea]
5XCY_A	2.17e-70	41	418	2	358	Chain A, Glucanase [Phanerodontia chrysosporium],5XCZ_A Chain A, Glucanase [Phanerodontia chrysosporium]
3VOJ_A	2.60e-69	38	418	3	362	Chain A, Cellobiohydrolase [Coprinopsis cinerea]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|P49075|GUX3_AGABI	3.78e-76	41	418	88	438	Exoglucanase 3 OS=Agaricus bisporus OX=5341 GN=cel3 PE=1 SV=1
sp|B2AE04|CEL6C_PODAN	9.26e-73	73	418	76	397	1,4-beta-D-glucan cellobiohydrolase CEL6C OS=Podospora anserina (strain S / ATCC MYA-4624 / DSM 980 / FGSC 10383) OX=515849 GN=CEL6C PE=1 SV=1
sp|A2QYR9|CBHC_ASPNC	2.85e-70	43	417	100	458	Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=cbhC PE=3 SV=1
sp|Q0CFP1|CBHC_ASPTN	2.99e-68	43	417	112	467	Probable 1,4-beta-D-glucan cellobiohydrolase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=cbhC PE=3 SV=1
sp|Q5B2E8|CBHC_EMENI	3.28e-67	43	417	96	454	1,4-beta-D-glucan cellobiohydrolase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=cbhC PE=1 SV=2

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000264	0.999727	CS pos: 17-18. Pr: 0.9776

TMHMM  Annotations     

There is no transmembrane helices in TPX41707.1.