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CAZyme Information: TPX41416.1

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Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Synchytrium endobioticum
Lineage Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum
CAZyme ID TPX41416.1
CAZy Family GH15
CAZyme Description unspecified product
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
517 56267.08 5.8071
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SendobioticumMB42 8031 N/A 0 8031
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.21:2 3.2.1.23:1 3.2.1.38:1 3.2.1.-:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH1 45 511 3e-140 0.9696969696969697

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395176 Glyco_hydro_1 5.15e-145 43 507 6 445
Glycosyl hydrolase family 1.
274539 BGL 7.76e-129 46 503 5 423
beta-galactosidase.
225343 BglB 1.14e-112 46 503 9 443
Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase [Carbohydrate transport and metabolism].
215435 PLN02814 1.54e-94 46 510 33 480
beta-glucosidase
215455 PLN02849 7.96e-87 46 510 35 480
beta-glucosidase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.17e-122 46 509 34 484
4.48e-122 43 509 31 484
6.93e-122 46 477 43 488
6.93e-122 46 477 43 488
6.93e-122 46 477 43 488

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.69e-127 46 513 36 483
Chain A, Glycoside hydrolase [Nannochloris],5YJ7_B Chain B, Glycoside hydrolase [Nannochloris],5YJ7_C Chain C, Glycoside hydrolase [Nannochloris],5YJ7_D Chain D, Glycoside hydrolase [Nannochloris]
2.71e-122 46 477 22 467
Crystal Structure of a Rice Os3BGlu6 Beta-Glucosidase [Oryza sativa Japonica Group],3GNP_A Crystal Structure of a Rice Os3BGlu6 Beta-Glucosidase with Octyl-Beta-D-Thio-Glucoside [Oryza sativa Japonica Group],3GNR_A Crystal Structure of a Rice Os3BGlu6 Beta-Glucosidase with covalently bound 2-deoxy-2-fluoroglucoside to the catalytic nucleophile E396 [Oryza sativa Japonica Group]
7.90e-122 46 477 23 468
Rice Os3BGlu6 Beta-Glucosidase E178Q mutant in a covalent complex with Glc from GA4GE. [Oryza sativa Japonica Group]
7.90e-122 46 477 23 468
Rice Os3BGlu6 E178Q with Covalent Glucosyl Moiety from p-nitrophenyl glucopyranoside. [Oryza sativa Japonica Group]
2.12e-118 44 513 12 462
Chain A, Beta-glucosidase [Phanerodontia chrysosporium],2E3Z_B Chain B, Beta-glucosidase [Phanerodontia chrysosporium],2E40_A Chain A, Beta-glucosidase [Phanerodontia chrysosporium],2E40_B Chain B, Beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.23e-122 46 477 43 488
Beta-glucosidase 34 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU34 PE=2 SV=1
3.87e-121 46 477 55 500
Beta-glucosidase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=BGLU6 PE=1 SV=1
7.79e-121 46 509 42 505
Beta-glucosidase 40 OS=Arabidopsis thaliana OX=3702 GN=BGLU40 PE=2 SV=1
9.94e-118 44 513 9 459
Beta-glucosidase 1A OS=Phanerodontia chrysosporium OX=2822231 GN=BGL1A PE=1 SV=1
6.71e-114 47 503 27 472
Beta-glucosidase 42 OS=Arabidopsis thaliana OX=3702 GN=BGLU42 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000315 0.999662 CS pos: 20-21. Pr: 0.9742

TMHMM  Annotations      help

There is no transmembrane helices in TPX41416.1.