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CAZyme Information: TPX40695.1

You are here: Home > Sequence: TPX40695.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Synchytrium endobioticum
Lineage Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum
CAZyme ID TPX40695.1
CAZy Family GH1
CAZyme Description mannan endo-1,4-beta-mannosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
441 QEAN01000303|CGC1 48379.76 5.1676
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SendobioticumMB42 8031 N/A 0 8031
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TPX40695.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH26 108 317 1.2e-27 0.47854785478547857

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
226609 ManB2 2.87e-08 133 281 182 294
Beta-mannanase [Carbohydrate transport and metabolism].
396639 Glyco_hydro_26 2.18e-07 115 265 135 253
Glycosyl hydrolase family 26.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.39e-58 10 343 42 358
1.43e-56 105 344 119 355
4.20e-55 96 344 107 355
2.09e-51 2 411 20 426
9.93e-51 87 364 91 372

PDB Hits      help

TPX40695.1 has no PDB hit.

Swiss-Prot Hits      help

TPX40695.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.929069 0.070942

TMHMM  Annotations      help

There is no transmembrane helices in TPX40695.1.