Species | Synchytrium endobioticum | |||||||||||
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Lineage | Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum | |||||||||||
CAZyme ID | TPX38650.1 | |||||||||||
CAZy Family | CE4 | |||||||||||
CAZyme Description | Chitin-binding type-1 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A507CAP3] | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 6863; End:9413 Strand: + |
MNLAISILIT TLLASLHTAI AYRCIERYAL TVTTDAQAFG ATAQFDECMH FPNGMALQFQ | 60 |
SGSLQDLKLP IVISSATCDG NELMQFADLS HNAHKTAYGT YDLLIPLNHS VYVKKIQLRA | 120 |
QKVDATRLYL DKIFIVQCTP AFHLQKRASE GSCGPEIGSC PFGYCCSTYG YCGTTRAYCG | 180 |
AGCQANHGNC TVVTIQTSPT VRSSASTANL SPSTSVTFSR SSSITRSISI KPSPFASPTP | 240 |
SQITSNLPSS SPATEASSII SSRSPPPAVQ NSATRYSTIT APRSTSLTRR PTGANPSPSK | 300 |
TIKTPTSWDN SEAAFPTLGA SCSSTCGSPQ IQCIDSICQR YWTQPLWTST TLTDKIMLEG | 360 |
WNVTKYAYDA GRSVTTDPAG GSELVMRVPY PAGSRNPAHE PIGGTGFYAS PLGDMTGMTH | 420 |
VVMQFDVYFP AEYNFVKGGK LPGGIGGHSG CSGSATATDC YSTRHMWRTN GLGEVYLYIY | 480 |
QPGQLPGFCS ENNTICIPTD GISVGRGSFK LATGVWNTIK QIVTLNSFDS KGNPVPDDKK | 540 |
AVIFRLTPDM HPVGIDFETF FGGSDDTWSS PTLQYSYFRR VSLSAY | 586 |
EC | 4.2.2.26:2 |
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Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
PL14 | 384 | 582 | 4.2e-41 | 0.9809523809523809 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
395135 | Chitin_bind_1 | 1.59e-12 | 152 | 185 | 1 | 36 | Chitin recognition protein. |
211311 | ChtBD1 | 3.51e-11 | 152 | 186 | 1 | 37 | Hevein or type 1 chitin binding domain. Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements. |
211316 | ChtBD1_1 | 3.87e-10 | 152 | 190 | 1 | 43 | Hevein or type 1 chitin binding domain; filamentous ascomycete subfamily. Hevein or type 1 chitin binding domain (ChtBD1), a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins such as hevein, a major IgE-binding allergen in natural rubber latex, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements. |
214593 | ChtBD1 | 1.79e-09 | 153 | 187 | 2 | 38 | Chitin binding domain. |
211312 | ChtBD1_GH19_hevein | 4.14e-08 | 153 | 188 | 3 | 40 | Hevein or Type 1 chitin binding domain subfamily co-occuring with family 19 glycosyl hydrolases or with barwin domains. This subfamily includes Hevein, a major IgE-binding allergen in natural rubber latex. ChtBD1 is a lectin domain found in proteins from plants and fungi that bind N-acetylglucosamine, plant endochitinases, wound-induced proteins, and the alpha subunit of Kluyveromyces lactis killer toxin. This domain is involved in the recognition and/or binding of chitin subunits; it typically occurs N-terminal to glycosyl hydrolase domains in chitinases, together with other carbohydrate-binding domains, or by itself in tandem-repeat arrangements. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
CDS02791.1|PL14_3 | 1.73e-53 | 360 | 586 | 54 | 288 |
CDS05384.1|PL14_3 | 1.38e-50 | 369 | 583 | 64 | 286 |
BAE81787.1|PL14|4.2.2.26 | 3.05e-39 | 363 | 584 | 39 | 263 |
UOH83040.1|PL14_3 | 4.08e-39 | 381 | 583 | 135 | 349 |
AFQ98373.1|PL14 | 7.85e-39 | 346 | 584 | 19 | 262 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5GMT_A | 1.94e-29 | 373 | 583 | 46 | 270 | Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai],5GMT_B Crystal structure of the marine PL-14 alginate lyase from Aplysia kurodai [Aplysia kurodai] |
3A0N_A | 1.54e-14 | 350 | 586 | 5 | 243 | Crystal structure of D-glucuronic acid-bound alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_A Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3GNE_B Crystal structure of alginate lyase vAL-1 from Chlorella virus [Paramecium bursaria Chlorella virus CVK2],3IM0_A Crystal structure of Chlorella virus vAL-1 soaked in 200mM D-glucuronic acid, 10% PEG-3350, and 200mM glycine-NaOH (pH 10.0) [Paramecium bursaria Chlorella virus CVK2] |
Other | SP_Sec_SPI | CS Position |
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0.002136 | 0.997837 | CS pos: 21-22. Pr: 0.9688 |
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