logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: TPX35416.1

You are here: Home > Sequence: TPX35416.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Synchytrium endobioticum
Lineage Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum
CAZyme ID TPX35416.1
CAZy Family AA5
CAZyme Description GH131_N domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A507CBN2]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
274 30444.70 6.9714
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SendobioticumMB42 8031 N/A 0 8031
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TPX35416.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH131 8 266 1.2e-39 0.9647058823529412

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
408085 GH131_N 2.68e-56 8 265 1 248
Glycoside hydrolase 131 catalytic N-terminal domain. This is the N-terminal domain found in glycoside hydrolase family 131 (GH131A) protein observed in Coprinopsis cinerea. GH131A exhibits bifunctional exo-beta-1,3-/-1,6- and endo-beta-1,4 activity toward beta-glucan. This domain is catalytic in nature though the catalytic mechanism of C. cinerea GH131A is different from that of typical glycosidases that use a pair of carboxylic acid residues as the catalytic residues. In the case of GH131A, Glu98 and His218 may form a catalytic dyad and Glu98 may activate His218 during catalysis.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
4.88e-35 8 271 31 301
2.55e-32 2 267 95 358
6.80e-29 3 264 27 281
1.01e-28 3 264 20 283
1.60e-26 3 264 20 282

PDB Hits      help

TPX35416.1 has no PDB hit.

Swiss-Prot Hits      help

TPX35416.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
1.000036 0.000001

TMHMM  Annotations      help

There is no transmembrane helices in TPX35416.1.