CAZyme Information: TPX33043.1

Basic Information

• Species: Synchytrium endobioticum
• Lineage: Chytridiomycota; Chytridiomycetes; ; Synchytriaceae; Synchytrium; Synchytrium endobioticum
• CAZyme ID: TPX33043.1
• CAZy Family: AA1
• CAZyme Description: unspecified product

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
581		65105.90	7.0761

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_SendobioticumMB42	8031	N/A	0	8031

• Gene Location: location=QEAN01000552:685-2813(+)

Full Sequence      

MSVWSTSGDWVLAQKTQRPLDDRISRNPVVNQDDTKQQKPNPLPGATLEQPVTNTEADVV
AKSENYSDKKGRKGQKPVSPGVVAKPSAAPSPSPDSKPSPGPSPALLLPGIPMKNAPAPP
DYGPHKQGSCGRYDYPKLASFLAGPSIHCDPKSSNSQVTCWTDYRGLDARNHSITLDHYT
ERDLLGSPPLILQSNPTMCYVEGTVQLVKQWANVARIIVRDCDGDYVIPPGGWQEWISGR
VDLVDQTGRVKTLDKELKPAEASMLLGRAPRCTQWVEDDVVFIIQHDYWHYDNPWHSLLD
HYAVFVTEQFMNATRPFQSMRVYFADDRLETSDPLHELWYMHSTKVGCLTRDVPEGLCFK
KTVFSLTGPDTELWREAVMASQCRNSRMLQDFSKRVISHLKLENVKPEGDYDMIVIATRN
TRKLSNRHDALLHLQKAFPNYTIKLVSFGDMSLAEQIKIARQTNILIAVHGAELTHLLWM
PEESAIIEIMPRGWGRQVFRNLAKFSGKLYIAVEAEIDPTPEARAWKNEHEQSVHQNVIV
DVEKLGAAVAGAIMVGSSSFDTRAVGRWKNGSRTDGFPEAY

Enzyme Prediction     

No EC number prediction in TPX33043.1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GT61	381	487	1.7e-18	0.8823529411764706

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
398330	DUF563	7.08e-22	381	516	76	208	Protein of unknown function (DUF563). Family of uncharacterized proteins.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BCS25464.1|GT61	2.35e-26	292	561	213	507
QDS73478.1|GT61	5.27e-25	293	529	212	460
BCS25463.1|GT61	1.82e-23	293	561	208	488
QPG94344.1|GT61	1.70e-22	319	517	240	438
QLI72075.1|GT61	3.14e-21	363	517	163	318

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7E9J_A	1.62e-06	357	491	186	325	Chain A, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9J_B Chain B, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9K_A Chain A, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9K_B Chain B, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9K_D Chain D, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9K_E Chain E, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9L_A Chain A, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus],7E9L_B Chain B, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Bos taurus]
6XFI_A	8.44e-06	407	491	232	315	Chain A, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Homo sapiens]
6XI2_A	8.47e-06	407	491	236	319	Chain A, Protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 [Homo sapiens]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|A0JND3|EOGT_BOVIN	1.99e-14	357	511	309	466	EGF domain-specific O-linked N-acetylglucosamine transferase OS=Bos taurus OX=9913 GN=EOGT PE=2 SV=1
sp|Q8BYW9|EOGT_MOUSE	5.84e-13	357	511	309	466	EGF domain-specific O-linked N-acetylglucosamine transferase OS=Mus musculus OX=10090 GN=Eogt PE=1 SV=1
sp|Q5NDL0|EOGT_RAT	5.84e-13	357	511	309	466	EGF domain-specific O-linked N-acetylglucosamine transferase OS=Rattus norvegicus OX=10116 GN=Eogt PE=2 SV=1
sp|Q08CY9|EOGT_XENTR	1.35e-12	357	544	307	498	EGF domain-specific O-linked N-acetylglucosamine transferase OS=Xenopus tropicalis OX=8364 GN=eogt PE=2 SV=1
sp|Q5NDL2|EOGT_HUMAN	1.79e-12	357	511	309	466	EGF domain-specific O-linked N-acetylglucosamine transferase OS=Homo sapiens OX=9606 GN=EOGT PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000040	0.000000

TMHMM  Annotations     

There is no transmembrane helices in TPX33043.1.