CAZyme Information: TPX21791.1

Basic Information

• Species: Coccidioides immitis
• Lineage: Ascomycota; Eurotiomycetes; ; Onygenaceae; Coccidioides; Coccidioides immitis
• CAZyme ID: TPX21791.1
• CAZy Family: GH16
• CAZyme Description: Pectate_lyase_3 domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A6C1LUH5]

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
477		52439.63	4.8889

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_CimmitisWA_211	7936	N/A	121	7815

• Gene Location: location=RHJW02000004:2826766-2828779(-)

Full Sequence      

MNKGRLDNPHFNKYEFHQQSMPRSMMEESKAFSNPTTAATLLASNKFEYSLPLELIDAAR
ILAESAPPEEMPGNHSLVAAQIQEKYKLKGNDTNTPPQSYVRPNGLEGYIVYPENMQEVI
TGWNDSFTLEKRAAQQYWMIDMAQHGVSPFAPSGYKVWRNIKDYGVKGDGVTDDTAAINR
AISDGNRCGDNCGSSTIYPAVVHFPPGNYLVSSSIIQYYNTQFLGDPYDYPTIVAAASFV
GLGVFSSNVYHEGGNGSEWYLNTNNFLRSIRNFKMDIRRTDPNAYVCAIHWQVAQGTSLE
NIEFYMMQDDKTTQQGIWMENGSGGFLTNLTFVGGNFGAYFGNQQFTTSHLASVNCKTAL
QVHWDWAWTMQDVIIESCMNGLVVTGGAGGPGSTGQSVGSLLLLGSIIANTPVGISTSLY
GRNSTSLLVQNTGFFNVKAAISENVEGKVLLPGGNEVMVDSWGFEFFVNSTDRGGIY

Enzyme Prediction     

EC	3.2.1.58:16

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	129	464	2e-112	0.44324324324324327

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	1.72e-95	158	382	1	212	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
227721	Pgu1	9.72e-05	160	210	84	125	Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAK47332.1|GH55	3.13e-181	1	477	1	498
QPC58009.1|GH55	1.26e-177	1	477	70	543
UPK93980.1|CBM50|GH55	3.20e-177	1	476	63	531
EAA66649.1|CBM50|GH55	1.03e-176	1	474	76	552
UQC82111.1|CBM50|GH55	4.66e-176	1	475	63	531

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M5Z_A	1.48e-93	133	475	2	336	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
3EQN_A	1.06e-79	137	462	26	348	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|D4B0V1|E13B_ARTBC	3.41e-88	134	457	40	362	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1
sp|P49426|EXG1_COCCA	1.21e-61	137	463	48	373	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
1.000048	0.000000

TMHMM  Annotations     

There is no transmembrane helices in TPX21791.1.