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CAZyme Information: TDH66413.1

You are here: Home > Sequence: TDH66413.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bremia lactucae
Lineage Oomycota; NA; ; Peronosporaceae; Bremia; Bremia lactucae
CAZyme ID TDH66413.1
CAZy Family GH81
CAZyme Description Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A484DV53]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
341 37761.45 8.3434
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BlactucaeSF5 1418 N/A 0 1418
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 39 319 2e-74 0.9479166666666666

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 7.58e-52 38 309 2 272
Pectinesterase.
178051 PLN02432 5.99e-43 38 319 13 276
putative pectinesterase
178113 PLN02497 1.38e-42 159 315 142 306
probable pectinesterase
178372 PLN02773 2.19e-42 73 337 41 298
pectinesterase
215179 PLN02314 4.75e-42 31 309 273 546
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.07e-118 1 339 1 343
1.15e-118 1 339 1 346
2.16e-118 1 339 1 343
7.82e-117 7 339 10 347
1.21e-113 27 339 24 337

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.53e-53 29 331 2 293
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
4.98e-53 29 331 2 293
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
3.52e-33 38 309 7 275
Chain A, Pectinesterase 1 [Solanum lycopersicum]
5.11e-33 31 309 4 279
Pectin methylesterase from Carrot [Daucus carota]
2.08e-12 39 327 7 336
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.02e-66 29 331 19 323
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
3.36e-65 29 329 19 322
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
4.66e-60 30 329 28 316
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
1.84e-59 12 329 6 316
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
1.84e-59 12 329 6 316
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.001365 0.998615 CS pos: 18-19. Pr: 0.9100

TMHMM  Annotations      help

There is no transmembrane helices in TDH66413.1.