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CAZyme Information: TDH66166.1

You are here: Home > Sequence: TDH66166.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bremia lactucae
Lineage Oomycota; NA; ; Peronosporaceae; Bremia; Bremia lactucae
CAZyme ID TDH66166.1
CAZy Family GH72
CAZyme Description Apple domain-containing protein [Source:UniProtKB/TrEMBL;Acc:A0A484DU36]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
303 32999.46 4.1722
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BlactucaeSF5 1418 N/A 0 1418
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in TDH66166.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 12 260 1.4e-58 0.9673469387755103

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
273167 rad23 0.002 194 276 75 153
UV excision repair protein Rad23. All proteins in this family for which functions are known are components of a multiprotein complex used for targeting nucleotide excision repair to specific parts of the genome. In humans, Rad23 complexes with the XPC protein. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
237082 PRK12373 0.007 148 278 196 323
NADH-quinone oxidoreductase subunit E.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.75e-81 1 194 1 195
7.44e-79 1 194 1 195
7.44e-79 1 194 1 195
2.24e-55 1 192 2 199
3.16e-55 1 192 2 199

PDB Hits      help

TDH66166.1 has no PDB hit.

Swiss-Prot Hits      help

TDH66166.1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000231 0.999750 CS pos: 22-23. Pr: 0.9802

TMHMM  Annotations      help

There is no transmembrane helices in TDH66166.1.