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CAZyme Information: TDH66055.1

You are here: Home > Sequence: TDH66055.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bremia lactucae
Lineage Oomycota; NA; ; Peronosporaceae; Bremia; Bremia lactucae
CAZyme ID TDH66055.1
CAZy Family GH5
CAZyme Description Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A484DTW6]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
343 37097.34 6.4725
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BlactucaeSF5 1418 N/A 0 1418
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 39 321 1.5e-76 0.9479166666666666

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 1.51e-56 38 311 2 272
Pectinesterase.
178372 PLN02773 1.02e-47 73 317 41 282
pectinesterase
178051 PLN02432 3.38e-47 38 321 13 276
putative pectinesterase
215170 PLN02301 1.03e-44 38 311 238 508
pectinesterase/pectinesterase inhibitor
178113 PLN02497 1.22e-44 159 317 142 306
probable pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.53e-120 1 341 1 343
7.09e-120 1 341 1 343
8.72e-119 1 341 1 346
7.41e-118 23 341 21 337
2.40e-116 1 341 1 347

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.47e-50 29 333 2 293
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
3.48e-50 29 333 2 293
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
2.69e-34 29 311 2 279
Pectin methylesterase from Carrot [Daucus carota]
3.73e-32 38 311 7 275
Chain A, Pectinesterase 1 [Solanum lycopersicum]
5.91e-08 39 329 7 336
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.12e-63 29 341 19 331
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
1.08e-60 29 333 19 323
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
2.16e-58 30 341 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1
2.16e-58 30 341 28 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
6.04e-58 30 331 28 316
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000266 0.999702 CS pos: 20-21. Pr: 0.9792

TMHMM  Annotations      help

There is no transmembrane helices in TDH66055.1.