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CAZyme Information: TDH65976.1

You are here: Home > Sequence: TDH65976.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bremia lactucae
Lineage Oomycota; NA; ; Peronosporaceae; Bremia; Bremia lactucae
CAZyme ID TDH65976.1
CAZy Family CE8
CAZyme Description Pectinesterase [Source:UniProtKB/TrEMBL;Acc:A0A484DTK4]
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
370 40800.33 7.5774
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_BlactucaeSF5 1418 N/A 0 1418
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 71 349 5.4e-68 0.9305555555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395871 Pectinesterase 4.14e-45 63 343 2 276
Pectinesterase.
215357 PLN02665 5.02e-42 1 346 2 341
pectinesterase family protein
178051 PLN02432 1.11e-38 59 349 9 276
putative pectinesterase
178098 PLN02480 1.79e-37 1 352 2 329
Probable pectinesterase
178606 PLN03043 1.23e-36 61 343 217 502
Probable pectinesterase/pectinesterase inhibitor; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.40e-144 49 369 25 347
1.47e-141 49 369 23 346
5.00e-140 49 369 26 347
6.62e-140 49 369 22 345
1.29e-139 1 369 1 343

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.30e-40 54 369 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Deglycosylated Form [Aspergillus niger ATCC 1015]
1.82e-40 54 369 2 299
Crystal Structure of the Pectin Methylesterase from Aspergillus niger in Penultimately Deglycosylated Form (N-acetylglucosamine Stub at Asn84) [Aspergillus niger ATCC 1015]
1.31e-32 65 343 9 283
Pectin methylesterase from Carrot [Daucus carota]
3.27e-29 60 357 3 296
Chain A, Pectinesterase 1 [Solanum lycopersicum]
3.89e-07 74 322 17 277
Chain A, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.12e-68 54 370 19 331
Pectinesterase OS=Aspergillus aculeatus OX=5053 GN=pme1 PE=2 SV=1
2.19e-61 54 369 19 329
Pectinesterase OS=Aspergillus niger OX=5061 GN=pme1 PE=1 SV=1
8.65e-51 43 369 16 324
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1
6.65e-50 43 369 16 324
Probable pectinesterase A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pmeA PE=3 SV=1
6.65e-50 43 369 16 324
Probable pectinesterase A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000235 0.999746 CS pos: 20-21. Pr: 0.9663

TMHMM  Annotations      help

There is no transmembrane helices in TDH65976.1.