logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SSD60884.1

You are here: Home > Sequence: SSD60884.1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saccharomycodes ludwigii
Lineage Ascomycota; Saccharomycetes; ; Saccharomycodaceae; Saccharomycodes; Saccharomycodes ludwigii
CAZyme ID SSD60884.1
CAZy Family GT2
CAZyme Description related to Probable family 17 glucosidase SCW10
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
441 45825.63 4.0296
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SludwigiiUTAD17 4017 N/A 2 4015
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SSD60884.1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH17 193 440 1.6e-25 0.9581993569131833

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227625 Scw11 5.50e-69 190 441 44 303
Exo-beta-1,3-glucanase, GH17 family [Carbohydrate transport and metabolism].
366033 Glyco_hydro_17 1.08e-05 374 441 228 299
Glycosyl hydrolases family 17.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.45e-102 190 439 115 364
4.46e-102 190 439 123 372
1.08e-101 190 439 151 400
1.21e-93 190 439 124 373
4.81e-93 193 439 127 373

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.26e-10 192 441 38 284
Crystal structure of glycoside hydrolase family 17 beta-1,3-glucanosyltransferase from Rhizomucor miehei [Rhizomucor miehei CAU432]
7.32e-10 192 441 38 284
Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaribiose [Rhizomucor miehei CAU432],4WTS_A Active-site mutant of Rhizomucor miehei beta-1,3-glucanosyltransferase in complex with laminaritriose [Rhizomucor miehei CAU432]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7.07e-80 190 441 135 388
Probable family 17 glucosidase SCW10 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SCW10 PE=1 SV=1
1.37e-75 190 441 132 385
Probable family 17 glucosidase SCW4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SCW4 PE=1 SV=1
1.03e-72 190 441 125 378
Cell surface mannoprotein MP65 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) OX=237561 GN=MP65 PE=1 SV=3
4.99e-48 190 440 301 556
Probable beta-glucosidase btgE OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=btgE PE=3 SV=1
5.28e-46 190 441 307 563
Probable beta-glucosidase btgE OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=btgE PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000241 0.999741 CS pos: 23-24. Pr: 0.9685

TMHMM  Annotations      help

There is no transmembrane helices in SSD60884.1.