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CAZyme Information: SPSK_10296-t39_1-p1

You are here: Home > Sequence: SPSK_10296-t39_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sporothrix schenckii
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Sporothrix; Sporothrix schenckii
CAZyme ID SPSK_10296-t39_1-p1
CAZy Family GT57|GT57
CAZyme Description glycoside hydrolase family 30 protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
514 54335.82 5.0773
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Sschenckii1099-18 10434 1397361 141 10293
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:3 3.2.1.-:3

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 41 510 9e-165 0.9887133182844243

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
227807 XynC 1.44e-28 42 478 36 417
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
396577 Glyco_hydro_59 1.99e-11 54 408 2 293
Glycosyl hydrolase family 59.
405300 Glyco_hydr_30_2 5.67e-10 42 370 4 355
O-Glycosyl hydrolase family 30.
307945 Glyco_hydro_30 7.01e-10 152 294 96 236
Glycosyl hydrolase family 30 TIM-barrel domain.
407314 Glyco_hydro_30C 1.12e-05 413 478 1 62
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
2.49e-139 23 498 1 453
3.23e-134 26 510 11 466
8.21e-132 41 513 51 494
1.72e-127 18 487 5 448
1.72e-127 18 487 5 448

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.00e-128 39 487 2 424
Chain A, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
6.29e-127 39 487 9 431
Chain AAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
1.31e-99 40 509 93 539
Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]
1.35e-99 41 509 23 468
Chain A, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
1.05e-96 39 473 22 417
Chain A, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.05e-128 18 487 5 448
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1
5.92e-13 36 455 81 483
Putative glucosylceramidase 1 OS=Caenorhabditis elegans OX=6239 GN=gba-1 PE=1 SV=2
2.37e-12 42 486 36 395
Glucuronoxylanase XynC OS=Bacillus subtilis (strain 168) OX=224308 GN=xynC PE=1 SV=1
4.00e-11 36 294 81 333
Putative glucosylceramidase 2 OS=Caenorhabditis elegans OX=6239 GN=gba-2 PE=3 SV=2
9.34e-11 41 462 87 495
Putative glucosylceramidase 4 OS=Caenorhabditis elegans OX=6239 GN=gba-4 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000305 0.999696 CS pos: 32-33. Pr: 0.9827

TMHMM  Annotations      download full data without filtering help

Start End
13 35