CAZyme Information: SPSK_08401-t39_1-p1

Basic Information

• Species: Sporothrix schenckii
• Lineage: Ascomycota; Sordariomycetes; ; Ophiostomataceae; Sporothrix; Sporothrix schenckii
• CAZyme ID: SPSK_08401-t39_1-p1
• CAZy Family: GH79
• CAZyme Description: glycoside hydrolase family 55 protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
792	AXCR01000007|CGC14	84422.99	5.4161

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Sschenckii1099-18	10434	1397361	141	10293

• Gene Location: location=AXCR01000007:6356224-6359557(-)

Full Sequence      

MAITPAALLASLTLATFWAGLVVAGQLNINRTRYPDVPDYGPRPNPAYMVDNTHNQFHVA
PDKGTQDGPVWDCSGSFEAYMTALSQGTVVRCSYDTSSNASIDASLVLPAVSSNTTVPGN
ASRAAGTNPHNWLASHSGSTRVANASQVGGKIITNMTVNYKTVTKFATDAAAGSSYWLTN
LAPLGTQPLAPSGYEFYRDVVADYKADNKGNTDASEAINAAVQDGNRCGKSCSSTSTLDA
IIYFPPGTYKICSPVIQFYYTQFIGDAINPPTIKGCSSFKGIALFDTDPYIPEGYMNQNQ
FFRHIRNFIFDLTDMPSATDDSGQALVPTGLHWQAAQATTLQNLVFNMPVAKSSNNVTHV
GIFMENGSGGFVSGLFPMYNNAPWNVLLCDTFNGGAIGWRAGSQQYTARSLTFRNCQQSV
QMVWDWGFNWQDIDIDGGTIAFNISGRGGSTSQGTGSVSILDSSISNVPIGVLTNTDNAS
PNIVLDNVRLTNVQTAVETEKGGSVLTGGTTTIDLWAIGRRYNGSTGSYQTGALTAPRKA
SNLLVGNSADSANFAKRLLLLGGDAGWRYKNDGTGDQTAAINMFLQKATAAGQVAYFPAG
VYQVGGTVFVPTGSRVQGASWSQIQGSGFFFSDRHHPQVMVRVGNKGEVGSVEIVEMLFS
VKGATAGAVLMQWNVAAASPGSAAMWDSHFRVGGAAGSDLDAKTCPKNSFNEQCIAASLL
FHVTPQANGFFENVWAWAADHDNDLNVDSEPDASVNQVSVYAARGMLIESQGPSWLYGTG
SEHSVMYQYQLY

Enzyme Prediction     

No EC number prediction in SPSK_08401-t39_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH55	170	791	1.6e-185	0.8

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
403800	Pectate_lyase_3	4.81e-62	197	443	1	213	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
403800	Pectate_lyase_3	1.37e-04	570	630	10	74	Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QSS52973.1|GH55	9.25e-296	22	792	13	721
QYT03660.1|GH55	5.71e-279	40	791	36	728
VBB73332.1|GH55	1.31e-278	49	791	1	708
QSS50317.1|GH55	1.95e-276	49	792	1	680
CAP67893.1|GH55	2.55e-272	49	791	1	704

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5M5Z_A	1.46e-140	172	790	2	611	Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila],5M60_A Chain A, Beta-1,3-glucanase [Thermochaetoides thermophila]
3EQN_A	8.09e-132	169	791	19	625	Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|D4B0V1|E13B_ARTBC	3.72e-123	165	791	32	738	Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1
sp|P49426|EXG1_COCCA	1.07e-105	170	790	42	645	Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum OX=5017 GN=EXG1 PE=1 SV=1
sp|P53626|E13B_TRIHA	7.18e-34	204	735	64	564	Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum OX=5544 GN=bgn13.1 PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.270151	0.729839	CS pos: 24-25. Pr: 0.6799

TMHMM  Annotations     

Start	End
7	29