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CAZyme Information: SPSK_07502-t39_1-p1

You are here: Home > Sequence: SPSK_07502-t39_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sporothrix schenckii
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Sporothrix; Sporothrix schenckii
CAZyme ID SPSK_07502-t39_1-p1
CAZy Family GH63
CAZyme Description extracellular exo-polygalacturonase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
478 50689.66 6.4879
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Sschenckii1099-18 10434 1397361 141 10293
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.67:7 3.2.1.-:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 130 462 4.9e-63 0.8676923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 1.65e-33 137 465 30 319
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
178580 PLN03003 1.45e-29 71 460 33 374
Probable polygalacturonase At3g15720
215120 PLN02188 1.13e-28 70 465 45 392
polygalacturonase/glycoside hydrolase family protein
215426 PLN02793 2.22e-28 71 458 62 406
Probable polygalacturonase
215540 PLN03010 2.14e-23 71 467 56 395
polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.66e-197 39 478 42 456
2.35e-197 39 478 42 456
9.51e-197 39 478 42 456
3.09e-190 39 478 41 455
8.28e-174 38 470 35 459

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.47e-68 64 476 18 388
Crystal structure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis]
1.88e-17 121 420 30 291
Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_B Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_C Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_D Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_E Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger],1NHC_F Structural insights into the processivity of endopolygalacturonase I from Aspergillus niger [Aspergillus niger]
3.66e-16 124 389 20 265
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
3.97e-16 124 389 28 273
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
3.97e-16 124 389 28 273
Chain A, endo-polygalacturonase [Evansstolkia leycettana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.09e-163 48 471 33 431
Probable exopolygalacturonase X OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgaX PE=3 SV=1
1.09e-163 48 471 33 431
Exopolygalacturonase X OS=Aspergillus niger OX=5061 GN=pgaX PE=3 SV=1
1.40e-163 48 470 34 431
Probable exopolygalacturonase X OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=pgaX PE=3 SV=2
1.40e-163 48 470 34 431
Probable exopolygalacturonase X OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=pgaX PE=3 SV=2
3.11e-163 48 471 33 431
Exopolygalacturonase X OS=Aspergillus tubingensis OX=5068 GN=pgaX PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000306 0.999674 CS pos: 18-19. Pr: 0.7522

TMHMM  Annotations      help

There is no transmembrane helices in SPSK_07502-t39_1-p1.