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CAZyme Information: SPSK_07123-t39_1-p1

You are here: Home > Sequence: SPSK_07123-t39_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sporothrix schenckii
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Sporothrix; Sporothrix schenckii
CAZyme ID SPSK_07123-t39_1-p1
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
736 AXCR01000004|CGC8 77354.77 5.7119
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Sschenckii1099-18 10434 1397361 141 10293
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.1.1.11:3 3.2.1.15:1 3.2.1.15:14 3.1.1.11:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 407 722 6.3e-65 0.92
CE8 50 326 5e-63 0.9201388888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395231 Glyco_hydro_28 2.48e-109 407 734 1 319
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
178372 PLN02773 5.57e-35 47 326 10 283
pectinesterase
178051 PLN02432 4.36e-33 41 327 13 274
putative pectinesterase
215367 PLN02682 5.90e-31 33 343 64 366
pectinesterase family protein
395871 Pectinesterase 7.93e-30 41 311 2 266
Pectinesterase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
0.0 31 736 38 767
0.0 32 736 38 772
0.0 31 735 42 792
1.08e-153 392 735 25 369
8.61e-153 392 735 25 369

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.67e-126 390 736 1 349
Endopolygalacturonase from the phytopathogenic fungus Fusarium moniliforme [Fusarium verticillioides]
1.85e-82 392 728 3 329
Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_B Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_C Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_D Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_E Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_F Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini],2IQ7_G Crystal structure of the polygalacturonase from Colletotrichum lupini and its implications for the interaction with polygalacturonase-inhibiting proteins [Colletotrichum lupini]
6.61e-80 392 730 11 339
Chain A, endo-polygalacturonase [Evansstolkia leycettana]
6.61e-80 392 730 11 339
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]
3.88e-79 392 730 3 331
Chain A, Endo-polygalacturonase [Evansstolkia leycettana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
9.05e-128 392 735 173 514
Probable endopolygalacturonase D OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pgaD PE=3 SV=1
7.38e-127 392 734 129 469
Probable endopolygalacturonase D OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pgaD PE=3 SV=1
1.94e-125 390 736 25 373
Polygalacturonase OS=Gibberella fujikuroi OX=5127 GN=PGA PE=1 SV=1
2.41e-124 392 735 151 492
Probable endopolygalacturonase D OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pgaD PE=3 SV=2
6.75e-124 392 735 151 492
Probable endopolygalacturonase D OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pgaD PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000258 0.999703 CS pos: 20-21. Pr: 0.9793

TMHMM  Annotations      help

There is no transmembrane helices in SPSK_07123-t39_1-p1.