logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SPSK_04330-t39_1-p1

You are here: Home > Sequence: SPSK_04330-t39_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sporothrix schenckii
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Sporothrix; Sporothrix schenckii
CAZyme ID SPSK_04330-t39_1-p1
CAZy Family GH172
CAZyme Description cellulase family protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
420 45131.79 6.9230
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Sschenckii1099-18 10434 1397361 141 10293
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.164:1

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 33 375 1.6e-154 0.9970326409495549

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395098 Cellulase 6.17e-06 35 376 2 270
Cellulase (glycosyl hydrolase family 5).

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.32e-193 3 420 5 426
1.53e-191 21 420 27 422
5.87e-170 1 420 8 423
1.75e-166 1 418 8 417
1.16e-164 19 418 26 417

PDB Hits      help

SPSK_04330-t39_1-p1 has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.40e-60 25 420 30 404
Glycosyl hydrolase 5 family protein OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1
1.36e-10 16 404 27 373
Endoglucanase OS=Paenibacillus polymyxa OX=1406 PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000254 0.999692 CS pos: 19-20. Pr: 0.9718

TMHMM  Annotations      help

There is no transmembrane helices in SPSK_04330-t39_1-p1.