CAZyme Information: SPSK_03174-t39_1-p1

Basic Information

• Species: Sporothrix schenckii
• Lineage: Ascomycota; Sordariomycetes; ; Ophiostomataceae; Sporothrix; Sporothrix schenckii
• CAZyme ID: SPSK_03174-t39_1-p1
• CAZy Family: GH109
• CAZyme Description: choline dehydrogenase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
634	AXCR01000010|CGC29	65955.75	7.2192

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_Sschenckii1099-18	10434	1397361	141	10293

• Gene Location: location=AXCR01000010:350962-352922(+)

Full Sequence      

MVVLPTRARGAGCGLGLLGLVLAAPALARVVPKHATLVDRATASSTTYDFVIAGGGIAGL
TVADRLTEDPSVTVLVVEAGPLDRGEDAVRVPGAYNPGAYLWPNLFSVPQAGLNNGVYFA
ATARVVGGGSTVNAMIFLRGDKDDYAGWTALGNRGWAWDDLLPYFCKSENFTFPAAAFAA
QNNISWTAHVHGTAGPVQATYPNYRFPGSGHWYEAAVHAGIAPDTDPNDGSVRGVFWLPL
AEDATTRTRSDARANHYDRVAAARPNYHLLPGTTVSKVLFSAGKKATGVQLVATDASSTA
PTTATVAASKEVLLAAGGLHTPQLLQLSGIGPQALLAQFGIPVVADLPGVGQNFQDQPTI
PMTYNFTNNVSPNWGSLLNNATYDAAQYARYESSKTGPYTLVRTLSTNFAALALQDITPD
YQAIVAAARARNATAALPTGTDPTVAAGYVAQRAVLLQQLAGEAAVGGLHWNTDTASTLY
AFKPLSRGTVAIASADVRDAPRIDYRTATDPTDLAVYAALLRKNRQLMAAPAMAALGPVE
TAPFGPGATSDAAVAAALVAALNPTNGHACCTAAMLPRRLGGVVDADLCVYGVTGLRVLD
ISFWPFPVAGAPSATMYAAGEKMAAVIKAKYGLW

Enzyme Prediction     

No EC number prediction in SPSK_03174-t39_1-p1.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
AA3	47	629	1.1e-164	0.9947183098591549

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
225186	BetA	1.42e-75	41	629	1	535	Choline dehydrogenase or related flavoprotein [Lipid transport and metabolism, General function prediction only].
235000	PRK02106	4.33e-65	44	630	2	534	choline dehydrogenase; Validated
366272	GMC_oxred_N	5.05e-26	114	359	15	218	GMC oxidoreductase. This family of proteins bind FAD as a cofactor.
398739	GMC_oxred_C	1.05e-23	484	623	1	143	GMC oxidoreductase. This domain found associated with pfam00732.
215420	PLN02785	1.18e-15	44	358	52	328	Protein HOTHEAD

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AEO67797.1|AA3_2	8.67e-240	23	633	21	638
CDP29496.1|AA3_2	1.39e-221	22	633	20	643
VBB81292.1|AA3_2	1.39e-221	22	633	20	643
CAP65285.1|AA3_2	1.39e-221	22	633	20	643
EAA58801.1|AA3_2	5.47e-195	28	632	18	618

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6ZE2_A	2.69e-235	46	633	4	588	Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE2_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE3_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE4_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE4_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE5_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE5_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE6_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE6_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE7_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],6ZE7_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],7AA2_A Chain A, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495],7AA2_B Chain B, FAD-dependent oxidoreductase [Thermochaetoides thermophila DSM 1495]
6O9N_A	6.87e-95	48	627	36	638	Structural insights on a new fungal aryl-alcohol oxidase [Thermothelomyces thermophilus],6O9N_B Structural insights on a new fungal aryl-alcohol oxidase [Thermothelomyces thermophilus]
4YNT_A	8.70e-52	44	628	2	565	Crystal structure of Aspergillus flavus FAD glucose dehydrogenase [Aspergillus flavus NRRL3357],4YNU_A Crystal structure of Aspergillus flavus FADGDH in complex with D-glucono-1,5-lactone [Aspergillus flavus NRRL3357]
6XUT_A	5.52e-50	39	629	8	589	Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUU_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina],6XUV_A Chain A, Oligosaccharide dehydrogenase [Trametes cinnabarina]
6YS1_AAA	4.77e-47	48	630	8	563	Chain AAA, Fatty acid Photodecarboxylase [Chlorella variabilis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
sp|Q5AUN2|XPTC_EMENI	9.71e-196	28	632	18	618	Dehydrogenase xptC OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=xptC PE=3 SV=1
sp|A0A2H3D1U1|ARMD5_ARMGA	4.64e-64	44	628	36	630	Dehydrogenase ARMGADRAFT_1018426 OS=Armillaria gallica OX=47427 GN=ARMGADRAFT_1018426 PE=1 SV=1
sp|Q5B8A1|PKFF_EMENI	1.17e-55	25	628	16	608	Dehydrogenase pkfF OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=pkfF PE=2 SV=1
sp|A1CFL2|PATE_ASPCL	2.02e-54	47	624	50	621	Patulin synthase OS=Aspergillus clavatus (strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1 / QM 1276 / 107) OX=344612 GN=patE PE=1 SV=1
sp|P0DO29|ERIK_HERER	1.18e-53	39	631	25	599	Dehydrogenase eriK OS=Hericium erinaceus OX=91752 GN=eriK PE=3 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.281040	0.718933	CS pos: 28-29. Pr: 0.6789

TMHMM  Annotations     

There is no transmembrane helices in SPSK_03174-t39_1-p1.