logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SPSK_00885-t39_1-p1

You are here: Home > Sequence: SPSK_00885-t39_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Sporothrix schenckii
Lineage Ascomycota; Sordariomycetes; ; Ophiostomataceae; Sporothrix; Sporothrix schenckii
CAZyme ID SPSK_00885-t39_1-p1
CAZy Family AA3
CAZyme Description endo-1,4-beta-xylanase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
222 23386.63 6.2297
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Sschenckii1099-18 10434 1397361 141 10293
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8:2

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH11 46 215 1.6e-55 0.9548022598870056

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
395367 Glyco_hydro_11 2.05e-76 44 216 3 175
Glycosyl hydrolases family 11.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.03e-111 1 222 1 221
5.22e-110 1 221 1 221
7.41e-110 1 221 1 221
2.47e-108 1 221 1 222
7.65e-107 1 221 1 219

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.42e-63 44 217 4 174
Chain A, Endo-1,4-beta-xylanase I [Trichoderma reesei]
3.03e-46 45 216 13 186
HIGH-RESOLUTION STRUCTURES OF XYLANASES FROM B. CIRCULANS AND T. HARZIANUM IDENTIFY A NEW FOLDING PATTERN AND IMPLICATIONS FOR THE ATOMIC BASIS OF THE CATALYSIS [Trichoderma harzianum]
5.88e-46 64 216 34 185
Chain A, Endo-1,4-beta-xylanase 2 [Trichoderma reesei],4XQ4_A Chain A, Endo-1,4-beta-xylanase 2 [Trichoderma reesei],4XQ4_B Chain B, Endo-1,4-beta-xylanase 2 [Trichoderma reesei],6JXL_A Crystal Structures of Endo-beta-1,4-xylanase II Complexed with Xylotriose [Trichoderma reesei RUT C-30],6K9O_A Crystal Structure Analysis of Protein [Trichoderma reesei RUT C-30],6KWD_A Crystal Structure Analysis of Endo-beta-1,4-Xylanase II Complexed with Xylotriose [Trichoderma reesei RUT C-30]
6.06e-46 64 216 35 186
Chain A, Endo-1,4-beta-xylanase 2 [Trichoderma reesei RUT C-30],6KW9_A Crystal Structure Analysis of Endo-beta-1,4-xylanase II Complexed with Xylotriose [Trichoderma reesei RUT C-30],6KWF_A Crystal Structure Analysis of Endo-beta-1,4-xylanase II Complexed with Xylotriose [Trichoderma reesei RUT C-30]
1.37e-45 53 221 48 215
Crystal structure of environmental isolated GH11 in complex with xylobiose and feruloyl-arabino-xylotriose [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.68e-64 1 217 1 225
Endo-1,4-beta-xylanase 1 OS=Hypocrea jecorina (strain QM6a) OX=431241 GN=TRIREDRAFT_74223 PE=1 SV=1
1.68e-64 1 217 1 225
Endo-1,4-beta-xylanase 1 OS=Hypocrea jecorina (strain ATCC 56765 / BCRC 32924 / NRRL 11460 / Rut C-30) OX=1344414 GN=xyn1 PE=1 SV=1
4.18e-50 9 209 8 208
Endo-1,4-beta-xylanase B OS=Talaromyces funiculosus OX=28572 GN=xynB PE=1 SV=1
3.00e-48 52 216 58 221
Endo-1,4-beta-xylanase B OS=Aspergillus kawachii (strain NBRC 4308) OX=1033177 GN=xlnB PE=3 SV=2
3.78e-48 1 213 1 214
Probable endo-1,4-beta-xylanase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xlnB PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000280 0.999697 CS pos: 19-20. Pr: 0.9486

TMHMM  Annotations      help

There is no transmembrane helices in SPSK_00885-t39_1-p1.