logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SPRG_20352-t26_1-p1

You are here: Home > Sequence: SPRG_20352-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia parasitica
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia parasitica
CAZyme ID SPRG_20352-t26_1-p1
CAZy Family GT60
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
461 KK583214|CGC1 51975.28 7.1010
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SparasiticaCBS223-65 20435 695850 314 20121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SPRG_20352-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT60 178 334 1.8e-23 0.4909090909090909
GT60 68 174 3.4e-20 0.3606060606060606

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
371506 GlcNAc 1.48e-30 68 334 1 350
Glycosyltransferase (GlcNAc). GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1, a ubiquitous eukaryotic protein, in the cytoplasm.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
6.79e-149 39 459 20 469
8.04e-147 40 366 40 413
2.06e-145 39 461 42 499
5.14e-117 40 366 43 419
2.05e-25 73 352 91 413

PDB Hits      help

SPRG_20352-t26_1-p1 has no PDB hit.

Swiss-Prot Hits      help

SPRG_20352-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000260 0.999734 CS pos: 17-18. Pr: 0.9734

TMHMM  Annotations      download full data without filtering help

Start End
420 442