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CAZyme Information: SPRG_19057-t26_1-p1

You are here: Home > Sequence: SPRG_19057-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia parasitica
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia parasitica
CAZyme ID SPRG_19057-t26_1-p1
CAZy Family GT41
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
962 104525.79 6.8383
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SparasiticaCBS223-65 20435 695850 314 20121
Gene Location Start: 702569; End:705865  Strand: +

Full Sequence      Download help

MYRASAKVSS  AHNDGIWSTV  WTSRNQILSG  SVDEVVKSWD  ASSTEDNAIL  PVVKQFPGHV60
LGTLGVAATK  DGRRAATSSL  DCQVRILNLE  TGGVEKTIDT  GAGETWQVAY  SPDGAFVATG120
SQQGKINIIN  VHDEKVVQSI  VVEEEKPAKA  SSSSDAKGKF  VLSVAYSPDG  KHLACSTFDG180
LVAIYDIESG  KQLQKYQDRT  KPVRSIAYSP  DGSFLLAASD  DMHVNIYDVA  HSSMVASVAG240
HISWVLSVAC  SPDGKHFATG  GGDRKVKIWD  LAAKSCLYTF  ECHTDQVWSV  AYNETGSRLV300
SGGDDALLQL  YEVSTASLAH  GHIQADIRAG  RVPSRGVNLG  GWLVAEHWMT  ASSSIWNGVP360
ADRASQGEYH  AMSVLGHNVG  DAAFESHRRS  FLTQADIAQI  GAAGLNTVRV  PIGYWIRGCG420
MLTGPLFQQC  SVFAPGGLKY  LDMLIQQWAR  AANVAVLISI  HGAPGSQNGN  DHSAAVMKGR480
VDWPNDPVNV  KVTRDLVLFL  VQRYKNEQAF  LGIGLLNEPD  GHMNSHVLFS  YYTASYNDVR540
SISDCILTMM  PRLYNQYAGN  GDAMGDFGKG  MQNVWIEWHP  YLIWGYESYS  EAMLLNQGID600
SIAKNIANWR  GHPLYFGEWS  VVTPSNTFSD  PNALASFRRK  LVTVMNTAQG  WAYWTWRADG660
DGYGHKWSLR  DLLRRMQYPI  VRTAANAVGS  SPPLSILQSN  GVGLSLLTQT  QSLAADPAWI720
AAMGPLVAER  WSYNPSTQQL  QSLTSGNCLD  AYFDNGLQRH  VIHSYSCDGT  NANQKWTLVN780
HQLSNKGLCL  ALVDAAINTD  LVANRRLVTC  DSASTAQFFT  LGIAVARLRI  ASLASLVLSA840
SLTFQAPSAR  DTSQLWLFNH  LDYTVMNQGS  GQCLDAYEAK  VGGAVHLYAC  SPGNVNQLWR900
YNPLTRQLQH  MGHAGYCLDV  YGPPHLNTCY  AMGNAAMWAQ  ALQLEWISYP  ALTGGYAAVT960
SS962

Enzyme Prediction      help

EC - - -

CAZyme Signature Domains help

Created with Snap48961441922402883363844324815295776256737217698178659134273GH5
Family Start End Evalue family coverage
GH5 385 661 6.7e-39 0.9711191335740073

CDD Domains      download full data without filtering help

Created with Snap489614419224028833638443248152957762567372176981786591312312WD4053322WD407315WD40263117WD401063157WD40
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
238121 WD40 3.10e-54 12 312 8 289
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
238121 WD40 2.03e-48 53 322 2 260
WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands; 7 copies of the repeat are present in this alignment.
225201 WD40 4.21e-39 7 315 149 443
WD40 repeat [General function prediction only].
293791 7WD40 7.62e-35 26 311 12 293
WD40 repeats in seven bladed beta propellers. The WD40 repeat is found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing, and cytoskeleton assembly. It typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40. Between the GH and WD dipeptides lies a conserved core. It forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel beta-sheet. The WD40 sequence repeat originally described in literature forms the first three strands of one blade and the last strand in the next blade. The C-terminal WD40 repeat completes the blade structure of the N-terminal WD40 repeat to create the closed ring propeller-structure. The residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands, allowing them to bind either stably or reversibly.
293791 7WD40 1.47e-33 106 315 2 204
WD40 repeats in seven bladed beta propellers. The WD40 repeat is found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing, and cytoskeleton assembly. It typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40. Between the GH and WD dipeptides lies a conserved core. It forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel beta-sheet. The WD40 sequence repeat originally described in literature forms the first three strands of one blade and the last strand in the next blade. The C-terminal WD40 repeat completes the blade structure of the N-terminal WD40 repeat to create the closed ring propeller-structure. The residues on the top and bottom surface of the propeller are proposed to coordinate interactions with other proteins and/or small ligands, allowing them to bind either stably or reversibly.

CAZyme Hits      help

Created with Snap4896144192240288336384432481529577625673721769817865913317932AIG56138.1|GH5313675UJR33211.1|GH5323674UIZ29723.1|GH5314674CCA15900.1|GH5313674AIG56251.1|GH5
Hit ID E-Value Query Start Query End Hit Start Hit End
AIG56138.1|GH5 3.96e-147 317 932 13 634
UJR33211.1|GH5 1.48e-98 313 675 20 383
UIZ29723.1|GH5 3.23e-93 323 674 1 356
CCA15900.1|GH5 5.03e-92 314 674 93 448
AIG56251.1|GH5 7.68e-92 313 674 9 397

PDB Hits      download full data without filtering help

Created with Snap48961441922402883363844324815295776256737217698178659133356791EQP_A3356793O6A_A3356794M80_A3356791CZ1_A3356792PF0_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1EQP_A 1.76e-29 335 679 10 379
Exo-b-(1,3)-glucanase From Candida Albicans [Candida albicans]
3O6A_A 4.68e-29 335 679 15 384
F144Y/F258Y Double Mutant of Exo-beta-1,3-glucanase from Candida albicans at 2 A [Candida albicans]
4M80_A 4.68e-29 335 679 15 384
The structure of E292S glycosynthase variant of exo-1,3-beta-glucanase from Candida albicans at 1.85A resolution [Candida albicans SC5314],4M81_A The structure of E292S glycosynthase variant of exo-1,3-beta-glucanase from Candida albicans complexed with 1-fluoro-alpha-D-glucopyranoside (donor) and p-nitrophenyl beta-D-glucopyranoside (acceptor) at 1.86A resolution [Candida albicans SC5314],4M82_A The structure of E292S glycosynthase variant of exo-1,3-beta-glucanase from Candida albicans complexed with p-nitrophenyl-gentiobioside (product) at 1.6A resolution [Candida albicans SC5314]
1CZ1_A 5.81e-29 335 679 10 379
Exo-b-(1,3)-glucanase From Candida Albicans At 1.85 A Resolution [Candida albicans],1EQC_A Exo-b-(1,3)-glucanase From Candida Albicans In Complex With Castanospermine At 1.85 A [Candida albicans]
2PF0_A 6.41e-29 335 679 16 385
Chain A, Hypothetical protein XOG1 [Candida albicans]

Swiss-Prot Hits      download full data without filtering help

Created with Snap4896144192240288336384432481529577625673721769817865913335679sp|A2RAR6|EXGA_ASPNC335679sp|Q7Z9L3|EXGA_ASPOR335679sp|B8N151|EXGA_ASPFN316679sp|Q5B5X8|EXGA_EMENI1190sp|Q26544|WSL17_SCHMA
Hit ID E-Value Query Start Query End Hit Start Hit End Description
sp|A2RAR6|EXGA_ASPNC 9.25e-33 335 679 43 403
Probable glucan 1,3-beta-glucosidase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=exgA PE=3 SV=1
sp|Q7Z9L3|EXGA_ASPOR 8.36e-32 335 679 32 393
Glucan 1,3-beta-glucosidase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=exgA PE=1 SV=1
sp|B8N151|EXGA_ASPFN 8.36e-32 335 679 32 393
Probable glucan 1,3-beta-glucosidase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=exgA PE=3 SV=1
sp|Q5B5X8|EXGA_EMENI 5.03e-31 316 679 9 391
Probable glucan 1,3-beta-glucosidase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=exgA PE=3 SV=2
sp|Q26544|WSL17_SCHMA 9.54e-31 1 190 1 177
WD repeat-containing protein SL1-17 OS=Schistosoma mansoni OX=6183 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.999901 0.000138

TMHMM  Annotations      help

There is no transmembrane helices in SPRG_19057-t26_1-p1.