dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: SPRG_07827-t26_1-p1

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Basic Information help

Species

Saprolegnia parasitica

Lineage

Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia parasitica

CAZyme ID

SPRG_07827-t26_1-p1

CAZy Family

GH28

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
546		57663.17	7.4353

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_SparasiticaCBS223-65	20435	695850	314	20121

Gene Location

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in SPRG_07827-t26_1-p1.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH6	32	274	2.8e-59	0.9455782312925171

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
396075	Glyco_hydro_6	3.31e-39	37	284	1	293	Glycosyl hydrolases family 6.
227616	CelA1	1.03e-13	76	313	186	451	Cellulase/cellobiase CelA1 [Carbohydrate transport and metabolism].
405052	PAN_4	2.51e-04	467	513	1	51	PAN domain.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
6.57e-216	1	537	1	559
1.45e-185	1	539	1	478
1.38e-168	1	400	1	395
4.17e-137	18	314	15	307
9.07e-137	1	316	1	311

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
5.31e-33	47	297	38	314	GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],5JX5_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_A GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_B GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_C GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102],6IDW_D GH6 Orpinomyces sp. Y102 enzyme [Orpinomyces sp. Y102]
7.95e-32	37	275	22	270	CRYSTAL STRUCTURE OF THE CATALYTIC DOMAIN OF A THERMOPHILIC ENDOCELLULASE [Thermobifida fusca],2BOD_X Catalytic domain of endo-1,4-glucanase Cel6A from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta-cellobioside [Thermobifida fusca]
1.38e-30	37	275	22	270	Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca [Thermobifida fusca],2BOF_X Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with cellotetrose [Thermobifida fusca],2BOG_X Catalytic domain of endo-1,4-glucanase Cel6A mutant Y73S from Thermobifida fusca in complex with methyl cellobiosyl-4-thio-beta- cellobioside [Thermobifida fusca]
8.71e-28	76	273	71	270	Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with cellobiose at 1.75 angstrom [Mycobacterium tuberculosis H37Rv]
8.71e-28	76	273	71	270	Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with METHYL-CELLOBIOSYL-4-DEOXY-4-THIO-BETA-D-CELLOBIOSIDE at 1.6 angstrom [Mycobacterium tuberculosis H37Rv]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
6.60e-30	37	275	53	301	Endoglucanase E-2 OS=Thermobifida fusca OX=2021 GN=celB PE=1 SV=2
1.18e-26	34	292	51	312	Endoglucanase A OS=Thermobispora bispora OX=2006 GN=celA PE=3 SV=1
3.64e-26	75	292	235	438	Endoglucanase A OS=Cellulomonas fimi OX=1708 GN=cenA PE=1 SV=1
3.70e-26	76	271	143	340	Endoglucanase 1 OS=Streptomyces sp. (strain KSM-9) OX=74575 GN=casA PE=1 SV=3
2.71e-19	41	292	58	312	Endoglucanase 1 OS=Streptomyces halstedii OX=1944 GN=celA1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	CS Position
0.000214	0.999765	CS pos: 19-20. Pr: 0.9712

TMHMM Annotations help

There is no transmembrane helices in SPRG_07827-t26_1-p1.