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CAZyme Information: SPRG_07813-t26_1-p1

You are here: Home > Sequence: SPRG_07813-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia parasitica
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia parasitica
CAZyme ID SPRG_07813-t26_1-p1
CAZy Family GH2
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
244 KK583219|CGC7 26790.96 10.0706
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SparasiticaCBS223-65 20435 695850 314 20121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.11:4

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL7 38 223 1.7e-18 0.8457943925233645

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
400923 Alginate_lyase2 2.55e-15 24 223 1 222
Alginate lyase. Alginate lyases are enzymes that degrade the linear polysaccharide alignate. They cleave the glycosidic linkage of alignate through a beta-elimination reaction. This family forms an all beta fold and is different to all alpha fold of pfam05426.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
3.18e-89 6 239 3 274
8.46e-14 12 220 17 238
5.67e-13 6 220 9 236
6.37e-13 16 237 638 876
2.03e-12 17 224 73 297

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.51e-12 15 224 53 269
Alginate lyase AlgAT5 from Polysaccharide Lyase family 7 [Defluviitalea]

Swiss-Prot Hits      help

SPRG_07813-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.000525 0.999445 CS pos: 16-17. Pr: 0.9668

TMHMM  Annotations      help

There is no transmembrane helices in SPRG_07813-t26_1-p1.