logo
sublogo
You are browsing environment: FUNGIDB
help

CAZyme Information: SPRG_04679-t26_1-p1

You are here: Home > Sequence: SPRG_04679-t26_1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Saprolegnia parasitica
Lineage Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia parasitica
CAZyme ID SPRG_04679-t26_1-p1
CAZy Family GH1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
226 24332.45 6.8120
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_SparasiticaCBS223-65 20435 695850 314 20121
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in SPRG_04679-t26_1-p1.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA17 8 210 2.7e-70 0.7673469387755102

CDD Domains      help

SPRG_04679-t26_1-p1 has no CDD domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.31e-171 1 226 1 226
7.63e-149 1 226 63 278
2.23e-143 1 225 1 217
3.12e-142 1 225 65 281
1.46e-108 15 199 17 192

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3.64e-31 19 195 1 172
Chain A, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4],6Z5Y_B Chain B, Lytic Polysaccharide Monooxygenase [Phytophthora infestans T30-4]

Swiss-Prot Hits      help

SPRG_04679-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI CS Position
0.065477 0.934520 CS pos: 18-19. Pr: 0.7976

TMHMM  Annotations      help

There is no transmembrane helices in SPRG_04679-t26_1-p1.