dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: SPRG_03154-t26_1-p1

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Basic Information help

Species

Saprolegnia parasitica

Lineage

Oomycota; NA; ; Saprolegniaceae; Saprolegnia; Saprolegnia parasitica

CAZyme ID

SPRG_03154-t26_1-p1

CAZy Family

CBM20|CBM47

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
426		44030.44	4.7160

Genome Property

Genome Version/Assembly ID	Genes	Strain NCBI Taxon ID	Non Protein Coding Genes	Protein Coding Genes
FungiDB-61_SparasiticaCBS223-65	20435	695850	314	20121

Gene Location

Full Sequence Download help

Enzyme Prediction help

EC	3.2.1.14:5	3.2.1.-:1

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH18	150	359	5.7e-22	0.5574324324324325

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
119365	GH18_chitinase	4.02e-18	155	327	25	209	The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel.
119349	GH18_chitinase-like	2.28e-16	155	328	23	177	The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are included in this alignment model.
395573	Glyco_hydro_18	1.16e-14	156	328	23	176	Glycosyl hydrolases family 18.
214753	Glyco_18	9.13e-12	155	327	25	184	Glyco_18 domain.
119350	GH18_chitinase_D-like	2.91e-11	162	271	34	140	GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start
8.17e-153	53	387	1	337
2.92e-60	120	422	76	382
9.73e-07	145	271	219	361
1.35e-06	167	274	316	420
1.36e-06	167	274	320	424

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
8.53e-06	175	271	55	150	1.25 Angstrom Crystal Structure of Chitinase from Bacillus anthracis. [Bacillus anthracis],5KZ6_B 1.25 Angstrom Crystal Structure of Chitinase from Bacillus anthracis. [Bacillus anthracis]

Swiss-Prot Hits help

SPRG_03154-t26_1-p1 has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	CS Position
0.999705	0.000315

TMHMM Annotations download full data without filtering help

Start	End
46	68