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CAZyme Information: SPCC736.04c.1-p1

You are here: Home > Sequence: SPCC736.04c.1-p1

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Schizosaccharomyces pombe
Lineage Ascomycota; Schizosaccharomycetes; ; Schizosaccharomycetaceae; Schizosaccharomyces; Schizosaccharomyces pombe
CAZyme ID SPCC736.04c.1-p1
CAZy Family GT62
CAZyme Description alpha-1,2-galactosyltransferase Gma12
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
375 42621.32 6.1838
Genome Property
Genome Version/Assembly ID Genes Strain NCBI Taxon ID Non Protein Coding Genes Protein Coding Genes
FungiDB-61_Spombe972h 6995 284812 1857 5138
Gene Location

Full Sequence      Download help

Enzyme Prediction      help

EC 2.4.1.-:7

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT34 102 341 1.7e-71 0.9878048780487805

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
368535 Glyco_transf_34 1.67e-114 100 339 1 238
galactosyl transferase GMA12/MNN10 family. This family contains a number of glycosyltransferase enzymes that contain a DXD motif. This family includes a number of C. elegans homologs where the DXD is replaced by DXH. Some members of this family are included in glycosyltransferase family 34.
215617 PLN03182 1.04e-09 128 188 153 209
xyloglucan 6-xylosyltransferase; Provisional
215616 PLN03181 4.24e-07 129 193 155 215
glycosyltransferase; Provisional

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
1.57e-256 1 375 1 375
1.57e-256 1 375 1 375
1.57e-256 1 375 1 375
1.57e-256 1 375 1 375
1.30e-145 1 373 1 373

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1.24e-06 99 269 31 172
Chain A, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSU_B Chain B, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSV_A Chain A, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSV_B Chain B, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSW_A Chain A, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana],6BSW_B Chain B, Xyloglucan 6-xylosyltransferase 1 [Arabidopsis thaliana]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2.78e-257 1 375 1 375
Alpha-1,2-galactosyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gma12 PE=1 SV=1
2.32e-146 1 373 1 373
Uncharacterized alpha-1,2-galactosyltransferase C1289.13c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC1289.13c PE=3 SV=1
2.78e-42 98 350 95 345
Probable alpha-1,2-galactosyltransferase gmh2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh2 PE=3 SV=1
1.07e-41 96 348 80 329
Alpha-1,2-galactosyltransferase gmh3 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh3 PE=3 SV=1
2.05e-40 99 346 82 324
Probable alpha-1,2-galactosyltransferase gmh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=gmh1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI CS Position
0.649936 0.350070

TMHMM  Annotations      download full data without filtering help

Start End
7 26